Difference between revisions of "CPD-9247"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] == * direction: ** REVERSIBLE * common name: ** aminotransferase ** aspartate_...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9247 CPD-9247] == * smiles: ** CCCCCCC=CCCCCCCCCCC(=O)[O-] * common name: ** cis-vaccenate...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9247 CPD-9247] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CCCCCCC=CCCCCCCCCCC(=O)[O-]
 
* common name:
 
* common name:
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** aminotransferase
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** cis-vaccenate
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** aspartate_aminotransferase
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* inchi key:
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* ec number:
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** InChIKey=UWHZIFQPPBDJPM-FPLPWBNLSA-M
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** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
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* molecular weight:
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** 281.457   
 
* Synonym(s):
 
* Synonym(s):
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** cis-vaccenic acid
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** (Z)-octadec-11-enoate
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** (Z)-11-octadecenoic acid
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** cis-11-octadecenoic acid
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** cis-octadec-11-enoic acid
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN0-7238]]
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-CYSTEATE]][c] '''<=>''' 1 [[CPD-380]][c] '''+''' 1 [[GLT]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 2-oxoglutarate[c] '''+''' 1 L-cysteate[c] '''<=>''' 1 3-sulfopyruvate[c] '''+''' 1 L-glutamate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6815]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_13538]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12889]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17809]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_15680]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17718]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6638]], sulfolactate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6638 PWY-6638]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6643]], coenzyme M biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6643 PWY-6643]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6642]], (R)-cysteate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6642 PWY-6642]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R02433 R02433]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5461069 5461069]
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{{#set: direction=REVERSIBLE}}
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* CHEMSPIDER:
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{{#set: common name=aminotransferase}}
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** [http://www.chemspider.com/Chemical-Structure.4574428.html 4574428]
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{{#set: common name=aspartate_aminotransferase}}
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* CHEBI:
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{{#set: ec number=EC-2.6.1.1}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=30827 30827]
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{{#set: gene associated=Tiso_gene_6815|Tiso_gene_13538|Tiso_gene_12889|Tiso_gene_17809|Tiso_gene_15680|Tiso_gene_17718}}
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{{#set: smiles=CCCCCCC=CCCCCCCCCCC(=O)[O-]}}
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{{#set: in pathway=PWY-6638|PWY-6643|PWY-6642}}
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{{#set: common name=cis-vaccenate}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: inchi key=InChIKey=UWHZIFQPPBDJPM-FPLPWBNLSA-M}}
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{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation}}
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{{#set: molecular weight=281.457    }}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: common name=cis-vaccenic acid|(Z)-octadec-11-enoate|(Z)-11-octadecenoic acid|cis-11-octadecenoic acid|cis-octadec-11-enoic acid}}
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{{#set: consumed by=RXN0-7238}}

Latest revision as of 20:51, 21 March 2018

Metabolite CPD-9247

  • smiles:
    • CCCCCCC=CCCCCCCCCCC(=O)[O-]
  • common name:
    • cis-vaccenate
  • inchi key:
    • InChIKey=UWHZIFQPPBDJPM-FPLPWBNLSA-M
  • molecular weight:
    • 281.457
  • Synonym(s):
    • cis-vaccenic acid
    • (Z)-octadec-11-enoate
    • (Z)-11-octadecenoic acid
    • cis-11-octadecenoic acid
    • cis-octadec-11-enoic acid

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCC=CCCCCCCCCCC(=O)[O-" cannot be used as a page name in this wiki.



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