Difference between revisions of "Tiso gene 1602"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16139 RXN-16139] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** abhydrolase_domain-c...")
(Created page with "Category:Gene == Gene Tiso_gene_1602 == * right end position: ** 5271 * transcription direction: ** POSITIVE * left end position: ** 21 * centisome position: ** 9.11972900...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16139 RXN-16139] ==
+
== Gene Tiso_gene_1602 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 5271
−
* common name:
+
* transcription direction:
−
** ORF
+
** POSITIVE
−
** abhydrolase_domain-containing_protein_4-like
+
* left end position:
−
* ec number:
+
** 21
−
** [http://enzyme.expasy.org/EC/3.1.1.4 EC-3.1.1.4]
+
* centisome position:
 +
** 9.11972900e-2
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[HOMOCYSMET-RXN]]
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-17282]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Glycerolipids]][c] '''+''' 1 [[5Z8Z11Z14Z17Z-EICOSAPENTAENOATE]][c]
+
** Source: [[annotation-experimental_annotation]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 H2O[c] '''+''' 1 a [glycerolipid]-icosapentaenoate[c] '''=>''' 1 H+[c] '''+''' 1 a glycerolipid[c] '''+''' 1 icosapentaenoate[c]
+
* Reaction: [[HOMOCYSMETB12-RXN]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_12960]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_15047]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_12959]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_15046]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY66-394]], aspirin triggered resolvin E biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-394 PWY66-394]
+
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[R00946]]
 +
** Source: [[orthology-synechocystis]]
 +
== Pathways associated ==
 +
* [[PWY-3841]]
 +
* [[ADENOSYLHOMOCYSCAT-PWY]]
 +
* [[PWY-702]]
 +
* [[PWY-2201]]
 +
* [[HOMOSER-METSYN-PWY]]
 +
* [[HSERMETANA-PWY]]
 +
* [[PWY-5041]]
 +
* [[1CMET2-PWY]]
 +
* [[PWY-6151]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=5271}}
−
{{#set: common name=ORF}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=abhydrolase_domain-containing_protein_4-like}}
+
{{#set: left end position=21}}
−
{{#set: ec number=EC-3.1.1.4}}
+
{{#set: centisome position=9.11972900e-2}}
−
{{#set: gene associated=Tiso_gene_12960|Tiso_gene_15047|Tiso_gene_12959|Tiso_gene_15046}}
+
{{#set: reaction associated=HOMOCYSMET-RXN|HOMOCYSMETB12-RXN|R00946}}
−
{{#set: in pathway=PWY66-394}}
+
{{#set: pathway associated=PWY-3841|ADENOSYLHOMOCYSCAT-PWY|PWY-702|PWY-2201|HOMOSER-METSYN-PWY|HSERMETANA-PWY|PWY-5041|1CMET2-PWY|PWY-6151}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:51, 21 March 2018

Gene Tiso_gene_1602

  • right end position:
    • 5271
  • transcription direction:
    • POSITIVE
  • left end position:
    • 21
  • centisome position:
    • 9.11972900e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1602&oldid=44207"