Difference between revisions of "RXN-11737"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.21-RXN 3.4.11.21-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Probable aspartyl a...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] == * direction: ** REVERSIBLE * common name: ** aminotransferase ** aspartate_...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.21-RXN 3.4.11.21-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Probable aspartyl aminopeptidase
+
** aminotransferase
 +
** aspartate_aminotransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.4.11.21 EC-3.4.11.21]
+
** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
+
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-CYSTEATE]][c] '''<=>''' 1 [[CPD-380]][c] '''+''' 1 [[GLT]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a protein[c] '''+''' 1 H2O[c] '''=>''' 1 a peptide[c]
+
** 1 2-oxoglutarate[c] '''+''' 1 L-cysteate[c] '''<=>''' 1 3-sulfopyruvate[c] '''+''' 1 L-glutamate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9879]]
+
* Gene: [[Tiso_gene_13538]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[Tiso_gene_15680]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6815]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_12889]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_17809]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_17718]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6638]], sulfolactate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6638 PWY-6638]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6643]], coenzyme M biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6643 PWY-6643]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6642]], (R)-cysteate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6642 PWY-6642]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-athaliana]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* LIGAND-RXN:
−
{{#set: common name=Probable aspartyl aminopeptidase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02433 R02433]
−
{{#set: ec number=EC-3.4.11.21}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: gene associated=Tiso_gene_9879}}
+
{{#set: common name=aminotransferase}}
−
{{#set: in pathway=}}
+
{{#set: common name=aspartate_aminotransferase}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: ec number=EC-2.6.1.1}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: gene associated=Tiso_gene_13538|Tiso_gene_15680|Tiso_gene_6815|Tiso_gene_12889|Tiso_gene_17809|Tiso_gene_17718}}
−
{{#set: reconstruction source=experimental_annotation}}
+
{{#set: in pathway=PWY-6638|PWY-6643|PWY-6642}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:51, 21 March 2018

Reaction RXN-11737

  • direction:
    • REVERSIBLE
  • common name:
    • aminotransferase
    • aspartate_aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-oxoglutarate[c] + 1 L-cysteate[c] <=> 1 3-sulfopyruvate[c] + 1 L-glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6638, sulfolactate degradation III: PWY-6638
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6643, coenzyme M biosynthesis II: PWY-6643
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6642, (R)-cysteate degradation: PWY-6642
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11737&oldid=44211"