Difference between revisions of "RXN-11737"

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(Created page with "Category:Gene == Gene Tiso_gene_19642 == * right end position: ** 2136 * transcription direction: ** POSITIVE * left end position: ** 29 * centisome position: ** 1.3488371...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] == * direction: ** REVERSIBLE * common name: ** aminotransferase ** aspartate_...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_19642 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] ==
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* right end position:
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* direction:
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** 2136
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** aminotransferase
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* left end position:
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** aspartate_aminotransferase
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** 29
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
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** 1.3488371   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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* With identifiers:
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-CYSTEATE]][c] '''<=>''' 1 [[CPD-380]][c] '''+''' 1 [[GLT]][c]
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* With common name(s):
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** 1 2-oxoglutarate[c] '''+''' 1 L-cysteate[c] '''<=>''' 1 3-sulfopyruvate[c] '''+''' 1 L-glutamate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_13538]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_15680]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_6815]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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== Pathways associated ==
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_12889]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_17809]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_17718]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[PWY-6638]], sulfolactate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6638 PWY-6638]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6643]], coenzyme M biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6643 PWY-6643]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6642]], (R)-cysteate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6642 PWY-6642]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: right end position=2136}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02433 R02433]
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{{#set: left end position=29}}
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{{#set: direction=REVERSIBLE}}
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{{#set: centisome position=1.3488371    }}
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{{#set: common name=aminotransferase}}
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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{{#set: common name=aspartate_aminotransferase}}
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{{#set: ec number=EC-2.6.1.1}}
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{{#set: gene associated=Tiso_gene_13538|Tiso_gene_15680|Tiso_gene_6815|Tiso_gene_12889|Tiso_gene_17809|Tiso_gene_17718}}
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{{#set: in pathway=PWY-6638|PWY-6643|PWY-6642}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:51, 21 March 2018

Reaction RXN-11737

  • direction:
    • REVERSIBLE
  • common name:
    • aminotransferase
    • aspartate_aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-oxoglutarate[c] + 1 L-cysteate[c] <=> 1 3-sulfopyruvate[c] + 1 L-glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6638, sulfolactate degradation III: PWY-6638
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6643, coenzyme M biosynthesis II: PWY-6643
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6642, (R)-cysteate degradation: PWY-6642
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11737&oldid=44211"