Difference between revisions of "CPD-14282"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=S-ADENMETSYN-RXN S-ADENMETSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** S-adenosylmet...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14282 CPD-14282] == * smiles: ** CCCCCCCCCCCCCCCCCCCCCC=CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP(...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=S-ADENMETSYN-RXN S-ADENMETSYN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14282 CPD-14282] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCCCCCCCCCCCCCCCCCCCCC=CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OCC1(C(OP(=O)([O-])[O-])C(O)C(O1)N3(C=NC2(C(N)=NC=NC=23))))=O
 
* common name:
 
* common name:
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** S-adenosylmethionine synthase 1
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** trans-lignocer-2-enoyl-CoA
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.5.1.6 EC-2.5.1.6]
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** InChIKey=UVJKZCSQLMWPMV-LQJAWXTISA-J
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* molecular weight:
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** 1112.113   
 
* Synonym(s):
 
* Synonym(s):
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** trans-2,3-dihydro-lignocerenoyl-CoA
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** (2E)-lignocerenoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-13308]]
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** 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[MET]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[PPI]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-13304]]
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** 1 ATP[c] '''+''' 1 H2O[c] '''+''' 1 L-methionine[c] '''=>''' 1 phosphate[c] '''+''' 1 S-adenosyl-L-methionine[c] '''+''' 1 diphosphate[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13443]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[SAM-PWY]], S-adenosyl-L-methionine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SAM-PWY SAM-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[METHIONINE-DEG1-PWY]], L-methionine degradation I (to L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE-DEG1-PWY METHIONINE-DEG1-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[ETHYL-PWY]], ethylene biosynthesis I (plants): [http://metacyc.org/META/NEW-IMAGE?object=ETHYL-PWY ETHYL-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5912]], 2'-deoxymugineic acid phytosiderophore biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5912 PWY-5912]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5041]], S-adenosyl-L-methionine cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21080 21080]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=71627272 71627272]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R00177 R00177]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=74693 74693]
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* UNIPROT:
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{{#set: smiles=CCCCCCCCCCCCCCCCCCCCCC=CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OCC1(C(OP(=O)([O-])[O-])C(O)C(O1)N3(C=NC2(C(N)=NC=NC=23))))=O}}
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** [http://www.uniprot.org/uniprot/P19358 P19358]
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{{#set: common name=trans-lignocer-2-enoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P18298 P18298]
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{{#set: inchi key=InChIKey=UVJKZCSQLMWPMV-LQJAWXTISA-J}}
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** [http://www.uniprot.org/uniprot/Q91X83 Q91X83]
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{{#set: molecular weight=1112.113    }}
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** [http://www.uniprot.org/uniprot/Q9PNJ8 Q9PNJ8]
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{{#set: common name=trans-2,3-dihydro-lignocerenoyl-CoA|(2E)-lignocerenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P54419 P54419]
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{{#set: consumed by=RXN-13308}}
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** [http://www.uniprot.org/uniprot/P56460 P56460]
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{{#set: produced by=RXN-13304}}
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** [http://www.uniprot.org/uniprot/Q9JVV6 Q9JVV6]
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** [http://www.uniprot.org/uniprot/Q9CEE0 Q9CEE0]
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** [http://www.uniprot.org/uniprot/O50163 O50163]
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** [http://www.uniprot.org/uniprot/P43762 P43762]
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** [http://www.uniprot.org/uniprot/P23686 P23686]
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** [http://www.uniprot.org/uniprot/P17562 P17562]
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** [http://www.uniprot.org/uniprot/Q7M4Y8 Q7M4Y8]
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** [http://www.uniprot.org/uniprot/Q9S992 Q9S992]
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** [http://www.uniprot.org/uniprot/Q90862 Q90862]
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** [http://www.uniprot.org/uniprot/P13444 P13444]
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** [http://www.uniprot.org/uniprot/P31153 P31153]
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** [http://www.uniprot.org/uniprot/Q00266 Q00266]
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** [http://www.uniprot.org/uniprot/P43281 P43281]
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** [http://www.uniprot.org/uniprot/P40320 P40320]
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** [http://www.uniprot.org/uniprot/P43280 P43280]
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** [http://www.uniprot.org/uniprot/P43282 P43282]
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** [http://www.uniprot.org/uniprot/P48498 P48498]
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** [http://www.uniprot.org/uniprot/P10659 P10659]
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** [http://www.uniprot.org/uniprot/Q39465 Q39465]
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** [http://www.uniprot.org/uniprot/P48466 P48466]
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** [http://www.uniprot.org/uniprot/P49612 P49612]
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** [http://www.uniprot.org/uniprot/P49613 P49613]
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** [http://www.uniprot.org/uniprot/P78003 P78003]
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** [http://www.uniprot.org/uniprot/Q49070 Q49070]
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** [http://www.uniprot.org/uniprot/P0A817 P0A817]
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** [http://www.uniprot.org/uniprot/P50299 P50299]
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** [http://www.uniprot.org/uniprot/O22350 O22350]
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** [http://www.uniprot.org/uniprot/P24260 P24260]
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** [http://www.uniprot.org/uniprot/O60198 O60198]
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** [http://www.uniprot.org/uniprot/Q12642 Q12642]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=S-adenosylmethionine synthase 1}}
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{{#set: ec number=EC-2.5.1.6}}
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{{#set: gene associated=Tiso_gene_13443}}
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{{#set: in pathway=SAM-PWY|METHIONINE-DEG1-PWY|ETHYL-PWY|PWY-5912|PWY-5041}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:51, 21 March 2018

Metabolite CPD-14282

  • smiles:
    • CCCCCCCCCCCCCCCCCCCCCC=CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OCC1(C(OP(=O)([O-])[O-])C(O)C(O1)N3(C=NC2(C(N)=NC=NC=23))))=O
  • common name:
    • trans-lignocer-2-enoyl-CoA
  • inchi key:
    • InChIKey=UVJKZCSQLMWPMV-LQJAWXTISA-J
  • molecular weight:
    • 1112.113
  • Synonym(s):
    • trans-2,3-dihydro-lignocerenoyl-CoA
    • (2E)-lignocerenoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCCCCCCCCCCCCCCCCC=CC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OCC1(C(OP(=O)([O-])[O-])C(O)C(O1)N3(C=NC2(C(N)=NC=NC=23))))=O" cannot be used as a page name in this wiki.




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