Difference between revisions of "Tiso gene 11323"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16020 RXN-16020] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
(Created page with "Category:Gene == Gene Tiso_gene_11323 == * right end position: ** 2621 * transcription direction: ** NEGATIVE * left end position: ** 158 * centisome position: ** 2.006604...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16020 RXN-16020] ==
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== Gene Tiso_gene_11323 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2621
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* common name:
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* transcription direction:
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** chloroplast_beta-keto_acyl_reductase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
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** 158
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* centisome position:
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** 2.006604   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.2.1.27-RXN]]
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** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-17262]][c] '''=>''' 1 [[CPD-17263]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 NAD(P)H[c] '''+''' 1 H+[c] '''+''' 1 3-oxo-icosatetraenoyl-CoA[c] '''=>''' 1 (8Z,11Z,14Z,17Z)-3-hydroxy-icosa-8,11,14,17-tetraenoyl-CoA[c] '''+''' 1 NAD(P)+[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-11213]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: automated-name-match
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* [[Tiso_gene_9871]]
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** Source: [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* Reaction: [[RXN-2902]]
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7049]], icosapentaenoate biosynthesis II (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7049 PWY-7049]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6958 PWY-6958]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-1781]]
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* [[P562-PWY]]
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* [[BETA-ALA-DEGRADATION-I-PWY]]
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* [[PWY-7574]]
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* [[VALDEG-PWY]]
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* [[PWY-5642]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2621}}
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-1.1.1.330}}
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{{#set: left end position=158}}
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{{#set: gene associated=Tiso_gene_9871}}
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{{#set: centisome position=2.006604    }}
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{{#set: in pathway=PWY-7049|PWY-6958}}
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{{#set: reaction associated=1.2.1.27-RXN|RXN-11213|RXN-2902}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-1781|P562-PWY|BETA-ALA-DEGRADATION-I-PWY|PWY-7574|VALDEG-PWY|PWY-5642}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:51, 21 March 2018

Gene Tiso_gene_11323

  • right end position:
    • 2621
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 158
  • centisome position:
    • 2.006604
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11323&oldid=44229"