Difference between revisions of "RXN1F-161"

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(Created page with "Category:Gene == Gene Tiso_gene_19642 == * left end position: ** 29 * transcription direction: ** POSITIVE * right end position: ** 2136 * centisome position: ** 1.3488371...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-161 RXN1F-161] == * direction: ** LEFT-TO-RIGHT * common name: ** GA12-aldehyde monooxygenase...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_19642 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-161 RXN1F-161] ==
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* left end position:
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* direction:
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** 29
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** GA12-aldehyde monooxygenase
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* right end position:
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** 2136
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* centisome position:
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** 1.3488371   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-138]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD1F-95]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 oxygen[c] '''+''' 1 gibberellin A12-aldehyde[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 H2O[c] '''+''' 1 gibberellin A12[c]
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***ec-number
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_3577]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_8263]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-5047]], gibberellin biosynthesis IV (Gibberella fujikuroi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5047 PWY-5047]
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** '''6''' reactions found over '''15''' reactions in the full pathway
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* [[PWY-5034]], GA12 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5034 PWY-5034]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=29}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22700 22700]
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{{#set: right end position=2136}}
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* LIGAND-RXN:
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{{#set: centisome position=1.3488371    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R06297 R06297]
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=GA12-aldehyde monooxygenase}}
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{{#set: gene associated=Tiso_gene_3577|Tiso_gene_8263}}
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{{#set: in pathway=PWY-5047|PWY-5034}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:51, 21 March 2018

Reaction RXN1F-161

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • GA12-aldehyde monooxygenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 oxygen[c] + 1 gibberellin A12-aldehyde[c] + 1 NADPH[c] => 1 NADP+[c] + 1 H2O[c] + 1 gibberellin A12[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5047, gibberellin biosynthesis IV (Gibberella fujikuroi): PWY-5047
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-5034, GA12 biosynthesis: PWY-5034
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN1F-161&oldid=44235"