Difference between revisions of "RXN-13445"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DUMP DUMP] == * smiles: ** C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2)) * inchi key: **...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13445 RXN-13445] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DUMP DUMP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13445 RXN-13445] ==
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* smiles:
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* direction:
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** C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=JSRLJPSBLDHEIO-SHYZEUOFSA-L
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** [http://enzyme.expasy.org/EC/1.3.1.93 EC-1.3.1.93]
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* common name:
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** dUMP
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* molecular weight:
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** 306.168   
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* Synonym(s):
 
* Synonym(s):
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** deoxyurdine-phosphate
 
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** 2'-deoxyuridine 5-monophosphate
 
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** deoxyuridine-phosphate
 
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** 2'-deoxyuridine 5'-phosphate
 
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** 2'-deoxyuridylic acid
 
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** 2'-deoxy-5'-uridylic acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-14143]]
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* With identifiers:
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* [[THYMIDYLATESYN-RXN]]
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** 1 [[Donor-H2]][c] '''+''' 1 [[CPD-14425]][c] '''=>''' 1 [[Acceptor]][c] '''+''' 1 [[CPD-14426]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-14220]]
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** 1 a reduced electron acceptor[c] '''+''' 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA[c] '''=>''' 1 an oxidized electron acceptor[c] '''+''' 1 docosapentaenoyl-CoA[c]
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* [[RXN-14199]]
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* [[DUTP-PYROP-RXN]]
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== Genes associated with this reaction  ==
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* [[DUTNH]]
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== Pathways  ==
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* [[DCMP-DEAMINASE-RXN]]
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* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
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== Reaction(s) of unknown directionality ==
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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** '''14''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 964-26-1
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{{#set: direction=LEFT-TO-RIGHT}}
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* METABOLIGHTS : MTBLC246422
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{{#set: ec number=EC-1.3.1.93}}
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* PUBCHEM:
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{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=18601100 18601100]
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{{#set: reconstruction category=annotation}}
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* HMDB : HMDB01409
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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* LIGAND-CPD:
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{{#set: reconstruction tool=pathwaytools}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00365 C00365]
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.18555972.html 18555972]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=246422 246422]
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* BIGG : dump
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{{#set: smiles=C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))}}
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{{#set: inchi key=InChIKey=JSRLJPSBLDHEIO-SHYZEUOFSA-L}}
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{{#set: common name=dUMP}}
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{{#set: molecular weight=306.168    }}
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{{#set: common name=deoxyurdine-phosphate|2'-deoxyuridine 5-monophosphate|deoxyuridine-phosphate|2'-deoxyuridine 5'-phosphate|2'-deoxyuridylic acid|2'-deoxy-5'-uridylic acid}}
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{{#set: consumed by=RXN-14143|THYMIDYLATESYN-RXN}}
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{{#set: produced by=RXN-14220|RXN-14199|DUTP-PYROP-RXN|DUTNH|DCMP-DEAMINASE-RXN}}
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Latest revision as of 19:52, 21 March 2018

Reaction RXN-13445

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a reduced electron acceptor[c] + 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA[c] => 1 an oxidized electron acceptor[c] + 1 docosapentaenoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7053, docosahexaenoate biosynthesis I (lower eukaryotes): PWY-7053
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway
  • PWY-7727, docosahexaenoate biosynthesis IV (4-desaturase, mammals): PWY-7727
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13445&oldid=44320"