Difference between revisions of "NAD-KIN-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DUMP DUMP] == * smiles: ** C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2)) * common name:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-KIN-RXN NAD-KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** diacylglycerol_kinase_c...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DUMP DUMP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-KIN-RXN NAD-KIN-RXN] ==
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* smiles:
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* direction:
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** C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** dUMP
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** diacylglycerol_kinase_catalytic_region
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* inchi key:
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** diacylglycerol_kinase
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** InChIKey=JSRLJPSBLDHEIO-SHYZEUOFSA-L
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** sphingosine_kinase_1
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* molecular weight:
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* ec number:
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** 306.168   
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** [http://enzyme.expasy.org/EC/2.7.1.23 EC-2.7.1.23]
 
* Synonym(s):
 
* Synonym(s):
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** deoxyurdine-phosphate
 
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** 2'-deoxyuridine 5-monophosphate
 
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** deoxyuridine-phosphate
 
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** 2'-deoxyuridine 5'-phosphate
 
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** 2'-deoxyuridylic acid
 
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** 2'-deoxy-5'-uridylic acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-14143]]
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* With identifiers:
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* [[THYMIDYLATESYN-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-14220]]
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** 1 NAD+[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 NADP+[c] '''+''' 1 H+[c]
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* [[RXN-14199]]
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* [[DUTP-PYROP-RXN]]
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== Genes associated with this reaction  ==
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* [[DUTNH]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[DCMP-DEAMINASE-RXN]]
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* Gene: [[Tiso_gene_1163]]
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== Reaction(s) of unknown directionality ==
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_14560]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_1420]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5083]], NAD/NADH phosphorylation and dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5083 PWY-5083]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[NADPHOS-DEPHOS-PWY-1]], NAD phosphorylation and transhydrogenation: [http://metacyc.org/META/NEW-IMAGE?object=NADPHOS-DEPHOS-PWY-1 NADPHOS-DEPHOS-PWY-1]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7268]], NAD/NADP-NADH/NADPH cytosolic interconversion (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7268 PWY-7268]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7269]], NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7269 PWY-7269]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[NADPHOS-DEPHOS-PWY]], NAD phosphorylation and dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=NADPHOS-DEPHOS-PWY NADPHOS-DEPHOS-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 964-26-1
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* RHEA:
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* BIGG : dump
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18629 18629]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=18601100 18601100]
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** [http://www.genome.jp/dbget-bin/www_bget?R00104 R00104]
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* HMDB : HMDB01409
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=diacylglycerol_kinase_catalytic_region}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00365 C00365]
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{{#set: common name=diacylglycerol_kinase}}
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* CHEMSPIDER:
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{{#set: common name=sphingosine_kinase_1}}
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** [http://www.chemspider.com/Chemical-Structure.18555972.html 18555972]
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{{#set: ec number=EC-2.7.1.23}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_1163|Tiso_gene_14560|Tiso_gene_1420}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=246422 246422]
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{{#set: in pathway=PWY-5083|NADPHOS-DEPHOS-PWY-1|PWY-7268|PWY-7269|NADPHOS-DEPHOS-PWY}}
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* METABOLIGHTS : MTBLC246422
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{{#set: reconstruction category=annotation}}
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{{#set: smiles=C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: common name=dUMP}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=JSRLJPSBLDHEIO-SHYZEUOFSA-L}}
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{{#set: molecular weight=306.168    }}
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{{#set: common name=deoxyurdine-phosphate|2'-deoxyuridine 5-monophosphate|deoxyuridine-phosphate|2'-deoxyuridine 5'-phosphate|2'-deoxyuridylic acid|2'-deoxy-5'-uridylic acid}}
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{{#set: consumed by=RXN-14143|THYMIDYLATESYN-RXN}}
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{{#set: produced by=RXN-14220|RXN-14199|DUTP-PYROP-RXN|DUTNH|DCMP-DEAMINASE-RXN}}
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Latest revision as of 19:53, 21 March 2018

Reaction NAD-KIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • diacylglycerol_kinase_catalytic_region
    • diacylglycerol_kinase
    • sphingosine_kinase_1
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 ATP[c] => 1 ADP[c] + 1 NADP+[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5083, NAD/NADH phosphorylation and dephosphorylation: PWY-5083
    • 3 reactions found over 6 reactions in the full pathway
  • NADPHOS-DEPHOS-PWY-1, NAD phosphorylation and transhydrogenation: NADPHOS-DEPHOS-PWY-1
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7268, NAD/NADP-NADH/NADPH cytosolic interconversion (yeast): PWY-7268
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7269, NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast): PWY-7269
    • 4 reactions found over 5 reactions in the full pathway
  • NADPHOS-DEPHOS-PWY, NAD phosphorylation and dephosphorylation: NADPHOS-DEPHOS-PWY
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=NAD-KIN-RXN&oldid=44369"