Difference between revisions of "Tiso gene 17141"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15212 RXN-15212] == * direction: ** LEFT-TO-RIGHT * common name: ** sphingomyelinase * ec numbe...")
(Created page with "Category:Gene == Gene Tiso_gene_17141 == * right end position: ** 3084 * transcription direction: ** NEGATIVE * left end position: ** 461 * centisome position: ** 6.504868...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15212 RXN-15212] ==
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== Gene Tiso_gene_17141 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3084
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* common name:
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* transcription direction:
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** sphingomyelinase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.1.4.12 EC-3.1.4.12]
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** 461
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* centisome position:
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** 6.504868   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[R03845]]
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** 1 [[WATER]][c] '''+''' 1 [[N-acyl-sphingosylphosphorylcholine]][c] '''=>''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[N-Acylsphingosine]][c]
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** Source: [[orthology-synechocystis]]
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* With common name(s):
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* Reaction: [[RXN-5285]]
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** 1 H2O[c] '''+''' 1 an N-acyl-sphingosylphosphorylcholine[c] '''=>''' 1 phosphocholine[c] '''+''' 1 H+[c] '''+''' 1 a sphingosine ceramide[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_12644]]
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** Source: [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* Reaction: [[RXN1F-10]]
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7277]], sphingolipid biosynthesis (mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7277 PWY-7277]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY3DJ-11281]], sphingomyelin metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-11281 PWY3DJ-11281]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[CHLOROPHYLL-SYN]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3084}}
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{{#set: common name=sphingomyelinase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-3.1.4.12}}
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{{#set: left end position=461}}
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{{#set: gene associated=Tiso_gene_12644}}
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{{#set: centisome position=6.504868    }}
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{{#set: in pathway=PWY-7277|PWY3DJ-11281}}
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{{#set: reaction associated=R03845|RXN-5285|RXN1F-10}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=CHLOROPHYLL-SYN}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:53, 21 March 2018

Gene Tiso_gene_17141

  • right end position:
    • 3084
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 461
  • centisome position:
    • 6.504868
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17141&oldid=44374"