Difference between revisions of "Tiso gene 17141"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15212 RXN-15212] == * direction: ** LEFT-TO-RIGHT * common name: ** sphingomyelinase * ec numbe...")
(Created page with "Category:Gene == Gene Tiso_gene_17141 == * right end position: ** 3084 * transcription direction: ** NEGATIVE * left end position: ** 461 * centisome position: ** 6.504868...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15212 RXN-15212] ==
+
== Gene Tiso_gene_17141 ==
* direction:
+
* right end position:
** LEFT-TO-RIGHT
+
** 3084
* common name:
+
* transcription direction:
** sphingomyelinase
+
** NEGATIVE
* ec number:
+
* left end position:
** [http://enzyme.expasy.org/EC/3.1.4.12 EC-3.1.4.12]
+
** 461
 +
* centisome position:
 +
** 6.504868   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reactions associated ==
* With identifiers:
+
* Reaction: [[R03845]]
** 1 [[WATER]][c] '''+''' 1 [[N-acyl-sphingosylphosphorylcholine]][c] '''=>''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[N-Acylsphingosine]][c]
+
** Source: [[orthology-synechocystis]]
* With common name(s):
+
* Reaction: [[RXN-5285]]
** 1 H2O[c] '''+''' 1 an N-acyl-sphingosylphosphorylcholine[c] '''=>''' 1 phosphocholine[c] '''+''' 1 H+[c] '''+''' 1 a sphingosine ceramide[c]
+
** Source: [[annotation-in-silico_annotation]]
 
+
*** Assignment: ec-number
== Genes associated with this reaction  ==
+
** Source: [[annotation-experimental_annotation]]
Genes have been associated with this reaction based on different elements listed below.
+
*** Assignment: ec-number
* [[Tiso_gene_12644]]
+
** Source: [[orthology-esiliculosus]]
** IN-SILICO_ANNOTATION
+
* Reaction: [[RXN1F-10]]
***EC-NUMBER
+
== Pathways  ==
+
* [[PWY-7277]], sphingolipid biosynthesis (mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7277 PWY-7277]
+
** '''5''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY3DJ-11281]], sphingomyelin metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-11281 PWY3DJ-11281]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
+
== Reconstruction information  ==
+
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways associated ==
 +
* [[CHLOROPHYLL-SYN]]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=3084}}
{{#set: common name=sphingomyelinase}}
+
{{#set: transcription direction=NEGATIVE}}
{{#set: ec number=EC-3.1.4.12}}
+
{{#set: left end position=461}}
{{#set: gene associated=Tiso_gene_12644}}
+
{{#set: centisome position=6.504868    }}
{{#set: in pathway=PWY-7277|PWY3DJ-11281}}
+
{{#set: reaction associated=R03845|RXN-5285|RXN1F-10}}
{{#set: reconstruction category=annotation}}
+
{{#set: pathway associated=CHLOROPHYLL-SYN}}
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:53, 21 March 2018

Gene Tiso_gene_17141

  • right end position:
    • 3084
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 461
  • centisome position:
    • 6.504868
  • Synonym(s):

Reactions associated

Pathways associated

External links