Difference between revisions of "Tiso gene 18007"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATEDEHYDRAT-RXN PREPHENATEDEHYDRAT-RXN] == * direction: ** REVERSIBLE * common name: ** bifu...")
(Created page with "Category:Gene == Gene Tiso_gene_18007 == * right end position: ** 2998 * transcription direction: ** NEGATIVE * left end position: ** 162 * centisome position: ** 4.882459...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PREPHENATEDEHYDRAT-RXN PREPHENATEDEHYDRAT-RXN] ==
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== Gene Tiso_gene_18007 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 2998
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* common name:
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* transcription direction:
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** bifunctional_chorismate_mutase_prephenate_dehydratase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/4.2.1.51 EC-4.2.1.51]
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** 162
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* centisome position:
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** 4.882459   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ADENOSINETRIPHOSPHATASE-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[PREPHENATE]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 prephenate[c] '''<=>''' 1 CO2[c] '''+''' 1 H2O[c] '''+''' 1 2-oxo-3-phenylpropanoate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_6815]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_5940]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Reaction: [[ATPASE-RXN]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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* Reaction: [[FA160COAabcp]]
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2998}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21648 21648]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=162}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01373 R01373]
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{{#set: centisome position=4.882459    }}
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* UNIPROT:
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{{#set: reaction associated=ADENOSINETRIPHOSPHATASE-RXN|ATPASE-RXN|FA160COAabcp}}
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** [http://www.uniprot.org/uniprot/P27603 P27603]
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** [http://www.uniprot.org/uniprot/P43900 P43900]
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** [http://www.uniprot.org/uniprot/P21203 P21203]
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** [http://www.uniprot.org/uniprot/Q58054 Q58054]
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** [http://www.uniprot.org/uniprot/Q9CEU2 Q9CEU2]
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** [http://www.uniprot.org/uniprot/Q9PII3 Q9PII3]
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** [http://www.uniprot.org/uniprot/P0A9J8 P0A9J8]
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** [http://www.uniprot.org/uniprot/Q02286 Q02286]
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** [http://www.uniprot.org/uniprot/P43909 P43909]
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** [http://www.uniprot.org/uniprot/P32452 P32452]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=bifunctional_chorismate_mutase_prephenate_dehydratase}}
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{{#set: ec number=EC-4.2.1.51}}
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{{#set: gene associated=Tiso_gene_6815|Tiso_gene_5940}}
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{{#set: in pathway=PWY-7432|PHESYN}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:53, 21 March 2018

Gene Tiso_gene_18007

  • right end position:
    • 2998
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 162
  • centisome position:
    • 4.882459
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18007&oldid=44417"