Difference between revisions of "RXN-12245"

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(Created page with "Category:Gene == Gene Tiso_gene_18007 == * left end position: ** 162 * transcription direction: ** NEGATIVE * right end position: ** 2998 * centisome position: ** 4.882459...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12245 RXN-12245] == * direction: ** LEFT-TO-RIGHT * common name: ** phytoene synthase * Synonym...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_18007 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12245 RXN-12245] ==
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* left end position:
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* direction:
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** 162
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** phytoene synthase
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* right end position:
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** 2998
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* centisome position:
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** 4.882459   
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* Synonym(s):
 
* Synonym(s):
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** prephytoene-diphosphate synthase
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** phytoene synthetase
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** PSase
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** geranylgeranyl-diphosphate geranylgeranyltransferase
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ADENOSINETRIPHOSPHATASE-RXN]]
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* With identifiers:
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** [[pantograph]]-[[esiliculosus]]
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** 1 [[CPD-464]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PHYTOENE]][c]
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* [[ATPASE-RXN]]
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* With common name(s):
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** in-silico_annotation
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** 1 prephytoene diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 all-trans-phytoene[c]
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***ec-number
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* [[FA160COAabcp]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* Gene: [[Tiso_gene_15914]]
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** Source: [[orthology-synechocystis]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=162}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=phytoene synthase}}
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{{#set: right end position=2998}}
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{{#set: common name=prephytoene-diphosphate synthase|phytoene synthetase|PSase|geranylgeranyl-diphosphate geranylgeranyltransferase}}
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{{#set: centisome position=4.882459    }}
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{{#set: gene associated=Tiso_gene_15914}}
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{{#set: reaction associated=ADENOSINETRIPHOSPHATASE-RXN|ATPASE-RXN|FA160COAabcp}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:53, 21 March 2018

Reaction RXN-12245

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phytoene synthase
  • Synonym(s):
    • prephytoene-diphosphate synthase
    • phytoene synthetase
    • PSase
    • geranylgeranyl-diphosphate geranylgeranyltransferase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 prephytoene diphosphate[c] => 1 diphosphate[c] + 1 all-trans-phytoene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12245&oldid=44447"