Difference between revisions of "RXN0-5114"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-5167 CPD-5167] == * common name: ** α-D-Man-a-(1→2)-α-D-Man-(1→2)-&al...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5114 RXN0-5114] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoserine_chloroplastic...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-5167 CPD-5167] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5114 RXN0-5114] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** α-D-Man-a-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol
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** phosphoserine_chloroplastic
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.3 EC-3.1.3.3]
 
* Synonym(s):
 
* Synonym(s):
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** an {α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol
 
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** {α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol
 
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** a (mannosyl)8-(N-acetylglucosaminyl)2-diphosphodolichol
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-5469]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[WATER]][c] '''+''' 1 [[3-P-SERINE]][c] '''=>''' 1 [[SER]][c] '''+''' 1 [[Pi]][c]
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* [[RXN-5468]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2O[c] '''+''' 1 3-phospho-L-serine[c] '''=>''' 1 L-serine[c] '''+''' 1 phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_6236]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_16271]]
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** Source: [[orthology-synechocystis]]
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== Pathways  ==
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* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=α-D-Man-a-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol}}
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* RHEA:
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{{#set: common name=an {α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol|{α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}diphosphodolichol|a (mannosyl)8-(N-acetylglucosaminyl)2-diphosphodolichol}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21208 21208]
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{{#set: consumed by=RXN-5469}}
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* LIGAND-RXN:
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{{#set: produced by=RXN-5468}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00582 R00582]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphoserine_chloroplastic}}
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{{#set: ec number=EC-3.1.3.3}}
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{{#set: gene associated=Tiso_gene_6236|Tiso_gene_16271}}
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{{#set: in pathway=SERSYN-PWY}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:53, 21 March 2018

Reaction RXN0-5114

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phosphoserine_chloroplastic
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 3-phospho-L-serine[c] => 1 L-serine[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • SERSYN-PWY, L-serine biosynthesis: SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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