Difference between revisions of "Tiso gene 1104"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17798 RXN-17798] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_dehy...")
(Created page with "Category:Gene == Gene Tiso_gene_1104 == * right end position: ** 26030 * transcription direction: ** POSITIVE * left end position: ** 24677 * centisome position: ** 94.780...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17798 RXN-17798] ==
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== Gene Tiso_gene_1104 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 26030
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* common name:
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* transcription direction:
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** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
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** POSITIVE
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** 3-hydroxyacyl-_dehydrogenase
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* left end position:
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** hydroxyacyl-coenzyme_a_mitochondrial
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** 24677
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
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** 94.780304   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GSHTRAN-RXN]]
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** 1 [[CPD-19151]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-19153]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 (S)-3-hydroxy-(5Z)-dodecenoyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 3-oxo-(5Z)-dodecenoyl-CoA[c]
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** Source: [[orthology-athaliana]]
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* Reaction: [[GST-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_5857]]
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* Reaction: [[RXN-13673]]
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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** EXPERIMENTAL_ANNOTATION
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* Reaction: [[RXN-15680]]
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***EC-NUMBER
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_14026]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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== Pathways associated ==
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***EC-NUMBER
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* [[PWY-7112]]
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** EXPERIMENTAL_ANNOTATION
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* [[PWY-6842]]
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***EC-NUMBER
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* [[PWY-4061]]
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* [[Tiso_gene_14262]]
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* [[PWY-7533]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18838]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18839]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=26030}}
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{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
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{{#set: left end position=24677}}
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{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
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{{#set: centisome position=94.780304    }}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: reaction associated=GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
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{{#set: gene associated=Tiso_gene_5857|Tiso_gene_14026|Tiso_gene_14262|Tiso_gene_18838|Tiso_gene_18839}}
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{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:53, 21 March 2018

Gene Tiso_gene_1104

  • right end position:
    • 26030
  • transcription direction:
    • POSITIVE
  • left end position:
    • 24677
  • centisome position:
    • 94.780304
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1104&oldid=44466"