Difference between revisions of "RXN-17854"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12978 RXN-12978] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** long...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17854 RXN-17854] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12978 RXN-12978] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17854 RXN-17854] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** polyketide_synthase
 
** long_chain_acyl-_synthetase
 
** acyl-_synthetase
 
** ORF
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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** [http://enzyme.expasy.org/EC/2.3.1.bv EC-2.3.1.bv]
 +
** [http://enzyme.expasy.org/EC/2.3.1.bx EC-2.3.1.bx]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[5Z8Z11Z14Z17Z-EICOSAPENTAENOATE]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[CPD-14018]][c]
+
** 1 [[L-methionyl-L-leucyl-Protein]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[N-Ac-L-methionyl-L-leucyl-Protein]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 icosapentaenoate[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 icosapentaenoyl-CoA[c]
+
** 1 an N-terminal-L-methionyl-L-leucyl-[protein][c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 an N-terminal Nα-acetyl-L-methionyl-L-leucyl-[protein][c] '''+''' 1 H+[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_13394]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_7855]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_135]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_136]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_348]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_9394]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
** [[pantograph]]-[[esiliculosus]]
 
* [[Tiso_gene_10876]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_500]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_4191]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[annotation]]
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
* [[annotation]]:
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** Source: [[annotation-experimental_annotation]]
** [[pathwaytools]]:
+
*** Tool: [[pathwaytools]]
*** [[experimental_annotation]]
+
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=polyketide_synthase}}
+
{{#set: ec number=EC-2.3.1.bv}}
{{#set: common name=long_chain_acyl-_synthetase}}
+
{{#set: ec number=EC-2.3.1.bx}}
{{#set: common name=acyl-_synthetase}}
+
{{#set: in pathway=PWY-7800}}
{{#set: common name=ORF}}
+
{{#set: ec number=EC-6.2.1.3}}
+
{{#set: gene associated=Tiso_gene_13394|Tiso_gene_7855|Tiso_gene_135|Tiso_gene_136|Tiso_gene_348|Tiso_gene_9394|Tiso_gene_10876|Tiso_gene_500|Tiso_gene_4191}}
+
{{#set: in pathway=}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 19:54, 21 March 2018

Reaction RXN-17854

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7800, Ac/N-end rule pathway: PWY-7800
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links