Difference between revisions of "RXN-10059"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_6106 == * left end position: ** 185 * transcription direction: ** NEGATIVE * right end position: ** 2128 * centisome position: ** 1.287942...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10059 RXN-10059] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_6106 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10059 RXN-10059] ==
−
* left end position:
+
* direction:
−
** 185
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** 3-oxoacyl-synthase
−
* right end position:
+
* ec number:
−
** 2128
+
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
−
* centisome position:
+
−
** 1.287942   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[PNKIN-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[Lignoceroyl-ACPs]][c] '''=>''' 1 [[3-oxo-cerotoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
−
***automated-name-match
+
* With common name(s):
−
** [[pantograph]]-[[athaliana]]
+
** 1 H+[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 a lignoceroyl-[acp][c] '''=>''' 1 a 3-oxo-cerotoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 coenzyme A[c]
−
** [[pantograph]]-[[esiliculosus]]
+
 
−
** [[pantograph]]-[[creinhardtii]]
+
== Genes associated with this reaction  ==
−
* [[PYRAMKIN-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** in-silico_annotation
+
* Gene: [[Tiso_gene_15991]]
−
***automated-name-match
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[athaliana]]
+
* Gene: [[Tiso_gene_19302]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
+
* Gene: [[Tiso_gene_14485]]
−
* [[PYRIDOXKIN-RXN]]
+
** Source: [[orthology-esiliculosus]]
−
** in-silico_annotation
+
* Gene: [[Tiso_gene_5939]]
−
***automated-name-match
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[athaliana]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** Assignment: EC-NUMBER
−
== Pathways associated ==
+
== Pathways  ==
−
* [[PWY-7204]]
+
* [[PWY-6113]], superpathway of mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6113 PWY-6113]
−
* [[PWY-7282]]
+
** '''8''' reactions found over '''12''' reactions in the full pathway
−
* [[PLPSAL-PWY]]
+
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
 +
** '''86''' reactions found over '''182''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=185}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=NEGATIVE}}
+
{{#set: common name=3-oxoacyl-synthase}}
−
{{#set: right end position=2128}}
+
{{#set: ec number=EC-2.3.1.41}}
−
{{#set: centisome position=1.287942    }}
+
{{#set: gene associated=Tiso_gene_15991|Tiso_gene_19302|Tiso_gene_14485|Tiso_gene_5939}}
−
{{#set: reaction associated=PNKIN-RXN|PYRAMKIN-RXN|PYRIDOXKIN-RXN}}
+
{{#set: in pathway=PWY-6113|PWYG-321}}
−
{{#set: pathway associated=PWY-7204|PWY-7282|PLPSAL-PWY}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:54, 21 March 2018

Reaction RXN-10059

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxoacyl-synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6113, superpathway of mycolate biosynthesis: PWY-6113
    • 8 reactions found over 12 reactions in the full pathway
  • PWYG-321, mycolate biosynthesis: PWYG-321
    • 86 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10059&oldid=44540"