Difference between revisions of "Tiso gene 3755"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a ** l...")
(Created page with "Category:Gene == Gene Tiso_gene_3755 == * right end position: ** 10683 * transcription direction: ** POSITIVE * left end position: ** 8934 * centisome position: ** 55.5527...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] ==
+
== Gene Tiso_gene_3755 ==
* direction:
+
* right end position:
** LEFT-TO-RIGHT
+
** 10683
* common name:
+
* transcription direction:
** lipoate-protein_ligase_a
+
** POSITIVE
** lipoate-protein_ligase
+
* left end position:
 +
** 8934
 +
* centisome position:
 +
** 55.55279   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reactions associated ==
* With identifiers:
+
* Reaction: [[DTMPKI-RXN]]
** 1 [[PROTON]][c] '''+''' 1 [[LIPOIC-ACID]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[LIPOYL-AMP]][c]
+
** Source: [[annotation-in-silico_annotation]]
* With common name(s):
+
*** Assignment: automated-name-match
** 1 H+[c] '''+''' 1 (R)-lipoate[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 lipoyl-adenylate[c]
+
== Pathways associated ==
 
+
* [[PWY-7210]]
== Genes associated with this reaction  ==
+
* [[PWY-7198]]
Genes have been associated with this reaction based on different elements listed below.
+
* [[PWY-7184]]
* [[Tiso_gene_4494]]
+
* [[PWY-7187]]
** IN-SILICO_ANNOTATION
+
* [[PWY-7197]]
***AUTOMATED-NAME-MATCH
+
* [[PWY0-166]]
* [[Tiso_gene_17216]]
+
* [[PWY-6545]]
** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
+
* [[Tiso_gene_17215]]
+
** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
+
* [[Tiso_gene_4493]]
+
** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
+
* [[Tiso_gene_8713]]
+
** IN-SILICO_ANNOTATION
+
***AUTOMATED-NAME-MATCH
+
== Pathways  ==
+
* [[PWY-6984]], lipoate salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6984 PWY-6984]
+
** '''2''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY0-522]], lipoate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-522 PWY0-522]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
+
== Reconstruction information  ==
+
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: right end position=10683}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12913 12913]
+
{{#set: transcription direction=POSITIVE}}
* LIGAND-RXN:
+
{{#set: left end position=8934}}
** [http://www.genome.jp/dbget-bin/www_bget?R07770 R07770]
+
{{#set: centisome position=55.55279    }}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=DTMPKI-RXN}}
{{#set: common name=lipoate-protein_ligase_a}}
+
{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7184|PWY-7187|PWY-7197|PWY0-166|PWY-6545}}
{{#set: common name=lipoate-protein_ligase}}
+
{{#set: gene associated=Tiso_gene_4494|Tiso_gene_17216|Tiso_gene_17215|Tiso_gene_4493|Tiso_gene_8713}}
+
{{#set: in pathway=PWY-6984|PWY0-522}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:54, 21 March 2018

Gene Tiso_gene_3755

  • right end position:
    • 10683
  • transcription direction:
    • POSITIVE
  • left end position:
    • 8934
  • centisome position:
    • 55.55279
  • Synonym(s):

Reactions associated

Pathways associated

External links