Difference between revisions of "Tiso gene 4021"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a ** l...")
(Created page with "Category:Gene == Gene Tiso_gene_4021 == * Synonym(s): == Reactions associated == * Reaction: RXN-11839 ** Source: annotation-in-silico_annotation *** Assignment:...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] ==
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== Gene Tiso_gene_4021 ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
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** lipoate-protein_ligase_a
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** lipoate-protein_ligase
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-11839]]
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** 1 [[ATP]][c] '''+''' 1 [[LIPOIC-ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[LIPOYL-AMP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 ATP[c] '''+''' 1 (R)-lipoate[c] '''+''' 1 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 lipoyl-adenylate[c]
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* Reaction: [[RXN-11840]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-11841]]
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* [[Tiso_gene_17216]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-11842]]
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* [[Tiso_gene_4494]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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* Reaction: [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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* [[Tiso_gene_17215]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_8713]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4493]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6984]], lipoate salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6984 PWY-6984]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY0-522]], lipoate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-522 PWY0-522]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: reaction associated=RXN-11839|RXN-11840|RXN-11841|RXN-11842|TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12913 12913]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R07770 R07770]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=lipoate-protein_ligase_a}}
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{{#set: common name=lipoate-protein_ligase}}
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{{#set: gene associated=Tiso_gene_17216|Tiso_gene_4494|Tiso_gene_17215|Tiso_gene_8713|Tiso_gene_4493}}
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{{#set: in pathway=PWY-6984|PWY0-522}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:54, 21 March 2018

Gene Tiso_gene_4021

  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4021&oldid=44585"