Difference between revisions of "Tiso gene 2841"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1-PHOSPHATIDYLINOSITOL-KINASE-RXN 1-PHOSPHATIDYLINOSITOL-KINASE-RXN] == * direction: ** LEFT-TO-RIG...")
(Created page with "Category:Gene == Gene Tiso_gene_2841 == * right end position: ** 5091 * transcription direction: ** POSITIVE * left end position: ** 1622 * centisome position: ** 8.847433...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1-PHOSPHATIDYLINOSITOL-KINASE-RXN 1-PHOSPHATIDYLINOSITOL-KINASE-RXN] ==
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== Gene Tiso_gene_2841 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5091
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* common name:
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* transcription direction:
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** phosphatidylinositol-4-kinase
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** POSITIVE
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** phosphatidylinositol_kinase
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* left end position:
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** phosphatidylinositol_4-kinase_beta
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** 1622
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** ORF
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* centisome position:
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* ec number:
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** 8.847433   
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** [http://enzyme.expasy.org/EC/2.7.1.67 EC-2.7.1.67]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3PGAREARR-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[L-1-phosphatidyl-inositols]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-1108]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 ATP[c] '''+''' 1 an L-1-phosphatidyl-inositol[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 a 1-phosphatidyl-1D-myo-inositol 4-phosphate[c]
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* Reaction: [[RXN-15509]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-15510]]
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* [[Tiso_gene_2572]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-15511]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_17240]]
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*** Assignment: ec-number
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[RXN-15512]]
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* [[Tiso_gene_12389]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-15513]]
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* [[Tiso_gene_17238]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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== Pathways associated ==
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* [[Tiso_gene_18529]]
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* [[PWY-1042]]
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** IN-SILICO_ANNOTATION
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* [[P341-PWY]]
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***EC-NUMBER
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* [[PWY-2221]]
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** EXPERIMENTAL_ANNOTATION
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* [[PWY-1622]]
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***EC-NUMBER
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* [[GLUCONEO-PWY]]
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* [[Tiso_gene_18530]]
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* [[GLYCOLYSIS]]
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** IN-SILICO_ANNOTATION
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* [[PWY-6901]]
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***EC-NUMBER
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* [[ANAGLYCOLYSIS-PWY]]
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* [[Tiso_gene_17239]]
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* [[PWY-7218]]
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** IN-SILICO_ANNOTATION
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* [[PWY-6405]]
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***EC-NUMBER
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* [[P124-PWY]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-6886]]
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== Pathways  ==
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* [[PWY66-399]]
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* [[PWY-6352]], 3-phosphoinositide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352]
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* [[PWY-5723]]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6142]]
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* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
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* [[PWY-5484]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7124]]
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== Reconstruction information  ==
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* [[P122-PWY]]
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* [[orthology]]:
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* [[PWY-7003]]
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=5091}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19877 19877]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=1622}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03361 R03361]
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{{#set: centisome position=8.847433    }}
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* UNIPROT:
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{{#set: reaction associated=3PGAREARR-RXN|RXN-15509|RXN-15510|RXN-15511|RXN-15512|RXN-15513}}
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** [http://www.uniprot.org/uniprot/P18688 P18688]
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY-2221|PWY-1622|GLUCONEO-PWY|GLYCOLYSIS|PWY-6901|ANAGLYCOLYSIS-PWY|PWY-7218|PWY-6405|P124-PWY|PWY-6886|PWY66-399|PWY-5723|PWY-6142|PWY-5484|PWY-7124|P122-PWY|PWY-7003}}
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** [http://www.uniprot.org/uniprot/P12798 P12798]
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** [http://www.uniprot.org/uniprot/P39104 P39104]
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** [http://www.uniprot.org/uniprot/P42356 P42356]
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** [http://www.uniprot.org/uniprot/Q9UBF8 Q9UBF8]
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** [http://www.uniprot.org/uniprot/P37297 P37297]
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** [http://www.uniprot.org/uniprot/Q28925 Q28925]
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** [http://www.uniprot.org/uniprot/O81281 O81281]
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** [http://www.uniprot.org/uniprot/O81129 O81129]
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** [http://www.uniprot.org/uniprot/Q9ZPE1 Q9ZPE1]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphatidylinositol-4-kinase}}
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{{#set: common name=phosphatidylinositol_kinase}}
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{{#set: common name=phosphatidylinositol_4-kinase_beta}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-2.7.1.67}}
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{{#set: gene associated=Tiso_gene_2572|Tiso_gene_17240|Tiso_gene_12389|Tiso_gene_17238|Tiso_gene_18529|Tiso_gene_18530|Tiso_gene_17239}}
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{{#set: in pathway=PWY-6352|PWY-6351}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:55, 21 March 2018

Gene Tiso_gene_2841

  • right end position:
    • 5091
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1622
  • centisome position:
    • 8.847433
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2841&oldid=44630"