Difference between revisions of "RNA-LIGASE-ATP-RXN"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_15047 == * left end position: ** 181 * transcription direction: ** NEGATIVE * right end position: ** 1538 * centisome position: ** 3.433883...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RNA-LIGASE-ATP-RXN RNA-LIGASE-ATP-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** gtp-bindi...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RNA-LIGASE-ATP-RXN RNA-LIGASE-ATP-RXN] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** gtp-binding_protein |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/6.5.1.3 EC-6.5.1.3] |
| − | * | + | |
| − | ** 3. | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | + | ** 1 [[ATP]][c] '''+''' 1 [[5-Phospho-RNA]][c] '''+''' 1 [[3Prime-OH-Terminated-RNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[RNAs]][c] '''+''' 1 [[PPI]][c] | |
| − | + | * With common name(s): | |
| − | + | ** 1 ATP[c] '''+''' 1 a 5'-phospho-ribonucleoside-[RNA][c] '''+''' 1 an [RNA]-3'-hydroxyl[c] '''=>''' 1 AMP[c] '''+''' 1 a ribonucleic acid[c] '''+''' 1 diphosphate[c] | |
| − | + | ||
| − | + | == Genes associated with this reaction == | |
| − | + | Genes have been associated with this reaction based on different elements listed below. | |
| − | + | * Gene: [[Tiso_gene_8398]] | |
| − | + | ** Source: [[annotation-in-silico_annotation]] | |
| − | + | *** Assignment: EC-NUMBER | |
| − | * | + | * Gene: [[Tiso_gene_8397]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | + | *** Assignment: EC-NUMBER | |
| − | + | * Gene: [[Tiso_gene_8396]] | |
| − | + | ** Source: [[annotation-in-silico_annotation]] | |
| − | + | *** Assignment: EC-NUMBER | |
| − | + | == Pathways == | |
| − | + | == Reconstruction information == | |
| − | * [[ | + | * Category: [[annotation]] |
| − | ** in-silico_annotation | + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** | + | *** Tool: [[pathwaytools]] |
| − | * [[ | + | |
| − | ** in-silico_annotation | + | |
| − | *** | + | |
| − | * [[ | + | |
| − | ** in-silico_annotation | + | |
| − | *** | + | |
| − | == Pathways | + | |
| − | + | ||
| − | * [[ | + | |
| − | * | + | |
| − | * [[ | + | |
| − | + | ||
| − | * | + | |
| − | * | + | |
| − | * [[ | + | |
| − | + | ||
== External links == | == External links == | ||
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R07640 R07640] |
| − | {{#set: | + | * UNIPROT: |
| − | {{#set: | + | ** [http://www.uniprot.org/uniprot/P00971 P00971] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=gtp-binding_protein}} |
| + | {{#set: ec number=EC-6.5.1.3}} | ||
| + | {{#set: gene associated=Tiso_gene_8398|Tiso_gene_8397|Tiso_gene_8396}} | ||
| + | {{#set: in pathway=}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:55, 21 March 2018
Contents
Reaction RNA-LIGASE-ATP-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- gtp-binding_protein
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ATP[c] + 1 5-Phospho-RNA[c] + 1 3Prime-OH-Terminated-RNAs[c] => 1 AMP[c] + 1 RNAs[c] + 1 PPI[c]
- With common name(s):
- 1 ATP[c] + 1 a 5'-phospho-ribonucleoside-[RNA][c] + 1 an [RNA]-3'-hydroxyl[c] => 1 AMP[c] + 1 a ribonucleic acid[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_8398
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_8397
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_8396
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
