Difference between revisions of "Tiso gene 14877"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DADPKIN-RXN DADPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** adenylate_kinase...")
(Created page with "Category:Gene == Gene Tiso_gene_14877 == * right end position: ** 3083 * transcription direction: ** POSITIVE * left end position: ** 783 * centisome position: ** 8.270836...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DADPKIN-RXN DADPKIN-RXN] ==
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== Gene Tiso_gene_14877 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3083
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* common name:
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* transcription direction:
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** ORF
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** POSITIVE
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** adenylate_kinase_domain-containing_protein_1
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* left end position:
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** nucleoside_diphosphate_kinase
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** 783
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
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** 8.270836   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[G6PADHh]]
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** 1 [[DADP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[DATP]][c] '''+''' 1 [[ADP]][c]
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** Source: [[orthology-creinhardtii]]
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* With common name(s):
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* Reaction: [[G6PBDHh]]
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** 1 dADP[c] '''+''' 1 ATP[c] '''=>''' 1 dATP[c] '''+''' 1 ADP[c]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[GLU6PDEHYDROG-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_17272]]
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** Source: [[orthology-synechocystis]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-esiliculosus]]
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***EC-NUMBER
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== Pathways associated ==
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* [[Tiso_gene_17271]]
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* [[PWY-7268]]
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** IN-SILICO_ANNOTATION
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* [[P122-PWY]]
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***EC-NUMBER
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* [[RUMP-PWY]]
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* [[Tiso_gene_9290]]
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* [[OXIDATIVEPENT-PWY]]
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** IN-SILICO_ANNOTATION
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* [[GLYCOLYSIS-E-D]]
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***EC-NUMBER
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* [[Tiso_gene_195]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18224]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16529]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7224]], purine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7224 PWY-7224]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7227]], adenosine deoxyribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7227 PWY-7227]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3083}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27674 27674]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=783}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01137 R01137]
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{{#set: centisome position=8.270836    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=G6PADHh|G6PBDHh|GLU6PDEHYDROG-RXN}}
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{{#set: common name=ORF}}
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{{#set: pathway associated=PWY-7268|P122-PWY|RUMP-PWY|OXIDATIVEPENT-PWY|GLYCOLYSIS-E-D}}
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{{#set: common name=adenylate_kinase_domain-containing_protein_1}}
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{{#set: common name=nucleoside_diphosphate_kinase}}
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{{#set: ec number=EC-2.7.4.6}}
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{{#set: gene associated=Tiso_gene_17272|Tiso_gene_17271|Tiso_gene_9290|Tiso_gene_195|Tiso_gene_18224|Tiso_gene_16529}}
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{{#set: in pathway=PWY-7220|PWY-7224|PWY-7227}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis|athaliana|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:55, 21 March 2018

Gene Tiso_gene_14877

  • right end position:
    • 3083
  • transcription direction:
    • POSITIVE
  • left end position:
    • 783
  • centisome position:
    • 8.270836
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14877&oldid=44633"