Difference between revisions of "RXN-7657"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.113-RXN 2.1.1.113-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7657 RXN-7657] == * direction: ** REVERSIBLE * common name: ** polyketide_synthase ** ORF * ec...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.113-RXN 2.1.1.113-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7657 RXN-7657] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** polyketide_synthase
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.113 EC-2.1.1.113]
+
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[DNA-Cytosines]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DNA-N4-Methylcytosine]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[ISOBUTANOL]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[CPD-7000]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 S-adenosyl-L-methionine[c] '''+''' 1 a cytosine in DNA[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 an N4-methylcytosine in DNA[c] '''+''' 1 H+[c]
+
** 1 NAD+[c] '''+''' 1 isobutanol[c] '''<=>''' 1 NADH[c] '''+''' 1 isobutanal[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10259]]
+
* Gene: [[Tiso_gene_6562]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5425]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_7649]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6563]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5424]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7396 PWY-7396]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7111]], pyruvate fermentation to isobutanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7111 PWY-7111]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5057]], L-valine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5057 PWY-5057]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03003 R03003]
+
{{#set: common name=polyketide_synthase}}
−
* UNIPROT:
+
{{#set: common name=ORF}}
−
** [http://www.uniprot.org/uniprot/Q04845 Q04845]
+
{{#set: ec number=EC-1.1.1.1}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: gene associated=Tiso_gene_6562|Tiso_gene_5425|Tiso_gene_7649|Tiso_gene_6563|Tiso_gene_5424}}
−
{{#set: ec number=EC-2.1.1.113}}
+
{{#set: in pathway=PWY-7396|PWY-7111|PWY-5057}}
−
{{#set: gene associated=Tiso_gene_10259}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+

Latest revision as of 19:55, 21 March 2018

Reaction RXN-7657

  • direction:
    • REVERSIBLE
  • common name:
    • polyketide_synthase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 isobutanol[c] <=> 1 NADH[c] + 1 isobutanal[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7396, butanol and isobutanol biosynthesis (engineered): PWY-7396
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7111, pyruvate fermentation to isobutanol (engineered): PWY-7111
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5057, L-valine degradation II: PWY-5057
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-7657&oldid=44634"