Difference between revisions of "6.2.1.34-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_15687 == * left end position: ** 1916 * transcription direction: ** POSITIVE * right end position: ** 4355 * centisome position: ** 39.3025...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.34-RXN 6.2.1.34-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_15687 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.34-RXN 6.2.1.34-RXN] ==
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* left end position:
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* direction:
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** 1916
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/6.2.1.34 EC-6.2.1.34]
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* right end position:
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** 4355
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* centisome position:
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** 39.302563   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PGLYCDEHYDROG-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[FERULIC-ACID]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[FERULOYL-COA]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 ferulate[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 feruloyl-CoA[c]
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***ec-number
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** [[pantograph]]-[[athaliana]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[synechocystis]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[esiliculosus]]
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* Gene: [[Tiso_gene_12275]]
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[orthology-athaliana]]
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* [[RXN0-300]]
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[synechocystis]]
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* Gene: [[Tiso_gene_14183]]
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== Pathways associated ==
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** Source: [[orthology-esiliculosus]]
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* [[SERSYN-PWY]]
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== Pathways  ==
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* [[PWY-6343]], ferulate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6343 PWY-6343]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** '''9''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=1916}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02194 R02194]
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{{#set: right end position=4355}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=39.302563    }}
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{{#set: ec number=EC-6.2.1.34}}
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{{#set: reaction associated=PGLYCDEHYDROG-RXN|RXN0-300}}
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{{#set: gene associated=Tiso_gene_12275|Tiso_gene_14183}}
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{{#set: pathway associated=SERSYN-PWY}}
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{{#set: in pathway=PWY-6343|PWY-1121}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:55, 21 March 2018

Reaction 6.2.1.34-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 coenzyme A[c] + 1 ferulate[c] => 1 AMP[c] + 1 diphosphate[c] + 1 feruloyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6343, ferulate degradation: PWY-6343
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 9 reactions found over 19 reactions in the full pathway

Reconstruction information

External links




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