Difference between revisions of "DCMP"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1-PHOSPHATIDYLINOSITOL-KINASE-RXN 1-PHOSPHATIDYLINOSITOL-KINASE-RXN] == * direction: ** LEFT-TO-RIG...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCMP DCMP] == * smiles: ** C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O * common name:...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1-PHOSPHATIDYLINOSITOL-KINASE-RXN 1-PHOSPHATIDYLINOSITOL-KINASE-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCMP DCMP] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O
 
* common name:
 
* common name:
−
** phosphatidylinositol-4-kinase
+
** dCMP
−
** phosphatidylinositol_kinase
+
* inchi key:
−
** phosphatidylinositol_4-kinase_beta
+
** InChIKey=NCMVOABPESMRCP-SHYZEUOFSA-L
−
** ORF
+
* molecular weight:
−
* ec number:
+
** 305.183   
−
** [http://enzyme.expasy.org/EC/2.7.1.67 EC-2.7.1.67]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** 2'-deoxycytidine 5'-monophosphate
 +
** deoxycytidylate
 +
** deoxycytidylic acid
 +
** deoxycytidine monophosphate
 +
** 2'-deoxycytidine 5'-phosphate
 +
** deoxycytidine-phosphate
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[ATDCM]]
−
** 1 [[L-1-phosphatidyl-inositols]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-1108]][c] '''+''' 1 [[ADP]][c]
+
* [[RXN-7913]]
−
* With common name(s):
+
* [[DCMP-DEAMINASE-RXN]]
−
** 1 an L-1-phosphatidyl-inositol[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 a 1-phosphatidyl-1D-myo-inositol 4-phosphate[c] '''+''' 1 ADP[c]
+
* [[ATDCMf]]
−
 
+
== Reaction(s) known to produce the compound ==
−
== Genes associated with this reaction  ==
+
* [[DCTP-PYROPHOSPHATASE-RXN]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[DCYTPT]]
−
* Gene: [[Tiso_gene_18530]]
+
* [[RXN-14198]]
−
** Source: [[annotation-in-silico_annotation]]
+
* [[RXN-14187]]
−
*** Assignment: EC-NUMBER
+
== Reaction(s) of unknown directionality ==
−
* Gene: [[Tiso_gene_12389]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_2572]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: AUTOMATED-NAME-MATCH
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_18529]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_17239]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_17238]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_17240]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
== Pathways  ==
+
−
* [[PWY-6352]], 3-phosphoinositide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352]
+
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* CAS : 1032-65-1
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19877 19877]
+
* BIGG : dcmp
−
* LIGAND-RXN:
+
* PUBCHEM:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03361 R03361]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7058169 7058169]
−
* UNIPROT:
+
* HMDB : HMDB01202
−
** [http://www.uniprot.org/uniprot/P18688 P18688]
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/P12798 P12798]
+
** [http://www.genome.jp/dbget-bin/www_bget?C00239 C00239]
−
** [http://www.uniprot.org/uniprot/P39104 P39104]
+
* CHEMSPIDER:
−
** [http://www.uniprot.org/uniprot/P42356 P42356]
+
** [http://www.chemspider.com/Chemical-Structure.5414501.html 5414501]
−
** [http://www.uniprot.org/uniprot/Q9UBF8 Q9UBF8]
+
* CHEBI:
−
** [http://www.uniprot.org/uniprot/P37297 P37297]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57566 57566]
−
** [http://www.uniprot.org/uniprot/Q28925 Q28925]
+
* METABOLIGHTS : MTBLC57566
−
** [http://www.uniprot.org/uniprot/O81281 O81281]
+
{{#set: smiles=C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O}}
−
** [http://www.uniprot.org/uniprot/O81129 O81129]
+
{{#set: common name=dCMP}}
−
** [http://www.uniprot.org/uniprot/Q9ZPE1 Q9ZPE1]
+
{{#set: inchi key=InChIKey=NCMVOABPESMRCP-SHYZEUOFSA-L}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: molecular weight=305.183    }}
−
{{#set: common name=phosphatidylinositol-4-kinase}}
+
{{#set: common name=2'-deoxycytidine 5'-monophosphate|deoxycytidylate|deoxycytidylic acid|deoxycytidine monophosphate|2'-deoxycytidine 5'-phosphate|deoxycytidine-phosphate}}
−
{{#set: common name=phosphatidylinositol_kinase}}
+
{{#set: consumed by=ATDCM|RXN-7913|DCMP-DEAMINASE-RXN|ATDCMf}}
−
{{#set: common name=phosphatidylinositol_4-kinase_beta}}
+
{{#set: produced by=DCTP-PYROPHOSPHATASE-RXN|DCYTPT|RXN-14198|RXN-14187}}
−
{{#set: common name=ORF}}
+
−
{{#set: ec number=EC-2.7.1.67}}
+
−
{{#set: gene associated=Tiso_gene_18530|Tiso_gene_12389|Tiso_gene_2572|Tiso_gene_18529|Tiso_gene_17239|Tiso_gene_17238|Tiso_gene_17240}}
+
−
{{#set: in pathway=PWY-6352|PWY-6351}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:55, 21 March 2018

Metabolite DCMP

  • smiles:
    • C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O
  • common name:
    • dCMP
  • inchi key:
    • InChIKey=NCMVOABPESMRCP-SHYZEUOFSA-L
  • molecular weight:
    • 305.183
  • Synonym(s):
    • 2'-deoxycytidine 5'-monophosphate
    • deoxycytidylate
    • deoxycytidylic acid
    • deoxycytidine monophosphate
    • 2'-deoxycytidine 5'-phosphate
    • deoxycytidine-phosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 1032-65-1
  • BIGG : dcmp
  • PUBCHEM:
  • HMDB : HMDB01202
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC57566
"C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DCMP&oldid=44694"