Difference between revisions of "3.4.11.2-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DADPKIN-RXN DADPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** adenylate_kinase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.2-RXN 3.4.11.2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** aminopeptidase_n ** m...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DADPKIN-RXN DADPKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.2-RXN 3.4.11.2-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ORF
+
** aminopeptidase_n
−
** adenylate_kinase_domain-containing_protein_1
+
** membrane_aminopeptidase_i
−
** nucleoside_diphosphate_kinase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
+
** [http://enzyme.expasy.org/EC/3.4.11.2 EC-3.4.11.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[DADP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DATP]][c]
+
** 1 [[POLYPEPTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-Amino-Acids]][c] '''+''' 1 [[POLYPEPTIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 dADP[c] '''=>''' 1 ADP[c] '''+''' 1 dATP[c]
+
** 1 a polypeptide[c] '''+''' 1 H2O[c] '''=>''' 1 an L-amino acid[c] '''+''' 1 a polypeptide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_16529]]
+
* Gene: [[Tiso_gene_860]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-athaliana]]
+
−
** Source: [[orthology-synechocystis]]
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
* Gene: [[Tiso_gene_17272]]
+
* Gene: [[Tiso_gene_16906]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Tiso_gene_195]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_9290]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_18224]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_17271]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7224]], purine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7224 PWY-7224]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7227]], adenosine deoxyribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7227 PWY-7227]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27674 27674]
+
** [http://www.uniprot.org/uniprot/P15144 P15144]
−
* LIGAND-RXN:
+
** [http://www.uniprot.org/uniprot/P15684 P15684]
−
** [http://www.genome.jp/dbget-bin/www_bget?R01137 R01137]
+
** [http://www.uniprot.org/uniprot/P15145 P15145]
 +
** [http://www.uniprot.org/uniprot/P04825 P04825]
 +
** [http://www.uniprot.org/uniprot/P45274 P45274]
 +
** [http://www.uniprot.org/uniprot/Q9JTU7 Q9JTU7]
 +
** [http://www.uniprot.org/uniprot/Q10730 Q10730]
 +
** [http://www.uniprot.org/uniprot/P15541 P15541]
 +
** [http://www.uniprot.org/uniprot/P37897 P37897]
 +
** [http://www.uniprot.org/uniprot/P37896 P37896]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ORF}}
+
{{#set: common name=aminopeptidase_n}}
−
{{#set: common name=adenylate_kinase_domain-containing_protein_1}}
+
{{#set: common name=membrane_aminopeptidase_i}}
−
{{#set: common name=nucleoside_diphosphate_kinase}}
+
{{#set: ec number=EC-3.4.11.2}}
−
{{#set: ec number=EC-2.7.4.6}}
+
{{#set: gene associated=Tiso_gene_860|Tiso_gene_16906}}
−
{{#set: gene associated=Tiso_gene_16529|Tiso_gene_17272|Tiso_gene_195|Tiso_gene_9290|Tiso_gene_18224|Tiso_gene_17271}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY-7220|PWY-7224|PWY-7227}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}}
+
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:55, 21 March 2018

Reaction 3.4.11.2-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • aminopeptidase_n
    • membrane_aminopeptidase_i
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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