Difference between revisions of "HEME-OXYGENASE-DECYCLIZING-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=COBALAMINSYN-RXN COBALAMINSYN-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.exp...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEME-OXYGENASE-DECYCLIZING-RXN HEME-OXYGENASE-DECYCLIZING-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=COBALAMINSYN-RXN COBALAMINSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEME-OXYGENASE-DECYCLIZING-RXN HEME-OXYGENASE-DECYCLIZING-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.8.26 EC-2.7.8.26]
+
** [http://enzyme.expasy.org/EC/1.14.14.18 EC-1.14.14.18]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ADENOSYLCOBINAMIDE-GDP]][c] '''+''' 1 [[ALPHA-RIBAZOLE]][c] '''<=>''' 1 [[GMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYLCOBALAMIN]][c]
+
** 1 [[PROTOHEME]][c] '''+''' 2 [[PROTON]][c] '''+''' 3 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 3 [[OXYGEN-MOLECULE]][c] '''=>''' 3 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[FE+2]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 1 [[BILIVERDINE]][c] '''+''' 3 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 adenosylcobinamide-GDP[c] '''+''' 1 &alpha;-ribazole[c] '''<=>''' 1 GMP[c] '''+''' 1 H+[c] '''+''' 1 adenosylcobalamin[c]
+
** 1 ferroheme b[c] '''+''' 2 H+[c] '''+''' 3 a reduced [NADPH-hemoprotein reductase][c] '''+''' 3 oxygen[c] '''=>''' 3 an oxidized [NADPH-hemoprotein reductase][c] '''+''' 1 Fe2+[c] '''+''' 1 carbon monoxide[c] '''+''' 1 biliverdin-IX-&alpha;[c] '''+''' 3 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8411]]
+
* Gene: [[Tiso_gene_19364]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_8410]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[synechocystis]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5508]], adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5508 PWY-5508]
+
* [[PWY-5874]], heme degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5874 PWY-5874]
−
** '''3''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[synechocystis]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16049 16049]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05223 R05223]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00311 R00311]
−
{{#set: direction=REVERSIBLE}}
+
* UNIPROT:
−
{{#set: ec number=EC-2.7.8.26}}
+
** [http://www.uniprot.org/uniprot/P23711 P23711]
−
{{#set: gene associated=Tiso_gene_8411|Tiso_gene_8410}}
+
** [http://www.uniprot.org/uniprot/P14901 P14901]
−
{{#set: in pathway=PWY-5508}}
+
** [http://www.uniprot.org/uniprot/P30519 P30519]
−
{{#set: reconstruction category=orthology}}
+
** [http://www.uniprot.org/uniprot/P06762 P06762]
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.uniprot.org/uniprot/P09601 P09601]
−
{{#set: reconstruction source=synechocystis}}
+
** [http://www.uniprot.org/uniprot/Q7M338 Q7M338]
 +
** [http://www.uniprot.org/uniprot/P14791 P14791]
 +
** [http://www.uniprot.org/uniprot/P32394 P32394]
 +
** [http://www.uniprot.org/uniprot/P72849 P72849]
 +
** [http://www.uniprot.org/uniprot/P74133 P74133]
 +
** [http://www.uniprot.org/uniprot/Q9RKR1 Q9RKR1]
 +
** [http://www.uniprot.org/uniprot/O48782 O48782]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-1.14.14.18}}
 +
{{#set: gene associated=Tiso_gene_19364}}
 +
{{#set: in pathway=PWY-5874}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:56, 21 March 2018

Reaction HEME-OXYGENASE-DECYCLIZING-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5874, heme degradation: PWY-5874
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=HEME-OXYGENASE-DECYCLIZING-RXN&oldid=44698"