Difference between revisions of "RXN-10058"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_4555 == * right end position: ** 10473 * transcription direction: ** POSITIVE * left end position: ** 9204 * centisome position: ** 62.4804...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10058 RXN-10058] == * direction: ** LEFT-TO-RIGHT * common name: ** 2,5-diamino-6-(5-phosphorib...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10058 RXN-10058] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** 2,5-diamino-6-(5-phosphoribitylamino)pyrimidin-4(3H)-one deaminase |
| − | + | ** drap_deaminase | |
| − | ** | + | * ec number: |
| − | * | + | ** [http://enzyme.expasy.org/EC/3.5.4 EC-3.5.4] |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| + | ** 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-10809]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CPD-1086]][c] | ||
| + | * With common name(s): | ||
| + | ** 1 H2O[c] '''+''' 1 H+[c] '''+''' 1 2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one[c] '''=>''' 1 ammonium[c] '''+''' 1 5-amino-6-(5-phospho-D-ribitylamino)uracil[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_17798]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | == Pathways == | ||
| + | * [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167] | ||
| + | ** '''4''' reactions found over '''10''' reactions in the full pathway | ||
| + | * [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168] | ||
| + | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** | + | *** Tool: [[pathwaytools]] |
| − | + | ||
| − | + | ||
== External links == | == External links == | ||
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R09377 R09377] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=2,5-diamino-6-(5-phosphoribitylamino)pyrimidin-4(3H)-one deaminase}} |
| − | {{#set: | + | {{#set: common name=drap_deaminase}} |
| − | {{#set: pathway | + | {{#set: ec number=EC-3.5.4}} |
| + | {{#set: gene associated=Tiso_gene_17798}} | ||
| + | {{#set: in pathway=PWY-6167|PWY-6168}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 20:56, 21 March 2018
Contents
Reaction RXN-10058
- direction:
- LEFT-TO-RIGHT
- common name:
- 2,5-diamino-6-(5-phosphoribitylamino)pyrimidin-4(3H)-one deaminase
- drap_deaminase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 H2O[c] + 1 H+[c] + 1 2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one[c] => 1 ammonium[c] + 1 5-amino-6-(5-phospho-D-ribitylamino)uracil[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_17798
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
- PWY-6167, flavin biosynthesis II (archaea): PWY-6167
- 4 reactions found over 10 reactions in the full pathway
- PWY-6168, flavin biosynthesis III (fungi): PWY-6168
- 6 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- LIGAND-RXN:
