Difference between revisions of "2.5.1.19-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_13099 == * left end position: ** 1012 * transcription direction: ** NEGATIVE * right end position: ** 6289 * centisome position: ** 15.4929...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.19-RXN 2.5.1.19-RXN] == * direction: ** REVERSIBLE * common name: ** pentafunctional_protein...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_13099 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.19-RXN 2.5.1.19-RXN] ==
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* left end position:
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* direction:
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** 1012
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** REVERSIBLE
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* transcription direction:
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* common name:
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** NEGATIVE
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** pentafunctional_protein
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* right end position:
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* ec number:
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** 6289
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** [http://enzyme.expasy.org/EC/2.5.1.19 EC-2.5.1.19]
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* centisome position:
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** 15.492958   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[SHIKIMATE-5P]][c] '''<=>''' 1 [[Pi]][c] '''+''' 1 [[3-ENOLPYRUVYL-SHIKIMATE-5P]][c]
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***ec-number
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* With common name(s):
−
== Pathways associated ==
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** 1 phosphoenolpyruvate[c] '''+''' 1 shikimate 3-phosphate[c] '''<=>''' 1 phosphate[c] '''+''' 1 5-enolpyruvoyl-shikimate 3-phosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_5753]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_5752]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=1012}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21256 21256]
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{{#set: right end position=6289}}
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* LIGAND-RXN:
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{{#set: centisome position=15.492958    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03460 R03460]
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{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
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* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P22299 P22299]
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** [http://www.uniprot.org/uniprot/P07547 P07547]
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** [http://www.uniprot.org/uniprot/P08566 P08566]
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** [http://www.uniprot.org/uniprot/P22487 P22487]
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** [http://www.uniprot.org/uniprot/P52312 P52312]
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** [http://www.uniprot.org/uniprot/Q9JTT3 Q9JTT3]
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** [http://www.uniprot.org/uniprot/Q03421 Q03421]
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** [http://www.uniprot.org/uniprot/P19786 P19786]
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** [http://www.uniprot.org/uniprot/P17688 P17688]
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** [http://www.uniprot.org/uniprot/P24497 P24497]
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** [http://www.uniprot.org/uniprot/P23981 P23981]
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** [http://www.uniprot.org/uniprot/P23281 P23281]
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** [http://www.uniprot.org/uniprot/Q04570 Q04570]
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** [http://www.uniprot.org/uniprot/P43905 P43905]
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** [http://www.uniprot.org/uniprot/Q59975 Q59975]
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** [http://www.uniprot.org/uniprot/P12421 P12421]
 +
** [http://www.uniprot.org/uniprot/P07637 P07637]
 +
** [http://www.uniprot.org/uniprot/P19688 P19688]
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** [http://www.uniprot.org/uniprot/P0A6D3 P0A6D3]
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** [http://www.uniprot.org/uniprot/P11043 P11043]
 +
{{#set: direction=REVERSIBLE}}
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{{#set: common name=pentafunctional_protein}}
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{{#set: ec number=EC-2.5.1.19}}
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{{#set: gene associated=Tiso_gene_5753|Tiso_gene_5752}}
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{{#set: in pathway=PWY-6163}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation|manual-primary_network}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:56, 21 March 2018

Reaction 2.5.1.19-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • pentafunctional_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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