Difference between revisions of "Tiso gene 7066"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSOPHOSPHOLIPASE-RXN LYSOPHOSPHOLIPASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** lys...")
(Created page with "Category:Gene == Gene Tiso_gene_7066 == * right end position: ** 11382 * transcription direction: ** NEGATIVE * left end position: ** 9953 * centisome position: ** 86.2328...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSOPHOSPHOLIPASE-RXN LYSOPHOSPHOLIPASE-RXN] ==
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== Gene Tiso_gene_7066 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 11382
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* common name:
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* transcription direction:
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** lysophospholipase
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** NEGATIVE
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** ORF
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* left end position:
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* ec number:
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** 9953
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** [http://enzyme.expasy.org/EC/3.1.1.5 EC-3.1.1.5]
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* centisome position:
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** 86.23289   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[SERINE-O-ACETTRAN-RXN]]
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** 1 [[2-Lysophosphatidylcholines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-1-GLYCERO-PHOSPHORYLCHOLINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Carboxylates]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a 1-acyl-sn-glycero-3-phosphocholine[c] '''+''' 1 H2O[c] '''=>''' 1 sn-glycero-3-phosphocholine[c] '''+''' 1 H+[c] '''+''' 1 a carboxylate[c]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_2505]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15692]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_19778]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_334]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12478]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_20565]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12479]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_12375]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_8353]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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* Category: [[annotation]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
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== Pathways associated ==
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*** Tool: [[pathwaytools]]
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* [[CYSTSYN-PWY]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-7274]]
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*** Tool: [[pathwaytools]]
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* [[PWY-6936]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=11382}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15177 15177]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=9953}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02746 R02746]
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{{#set: centisome position=86.23289    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R07291 R07291]
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{{#set: reaction associated=SERINE-O-ACETTRAN-RXN}}
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* UNIPROT:
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{{#set: pathway associated=CYSTSYN-PWY|PWY-7274|PWY-6936}}
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** [http://www.uniprot.org/uniprot/O07427 O07427]
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** [http://www.uniprot.org/uniprot/Q7M3V3 Q7M3V3]
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** [http://www.uniprot.org/uniprot/P07000 P07000]
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** [http://www.uniprot.org/uniprot/P0ADA1 P0ADA1]
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** [http://www.uniprot.org/uniprot/P39457 P39457]
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** [http://www.uniprot.org/uniprot/Q03674 Q03674]
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** [http://www.uniprot.org/uniprot/P53541 P53541]
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** [http://www.uniprot.org/uniprot/P78854 P78854]
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** [http://www.uniprot.org/uniprot/O42970 O42970]
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** [http://www.uniprot.org/uniprot/Q9P327 Q9P327]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=lysophospholipase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.1.1.5}}
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{{#set: gene associated=Tiso_gene_2505|Tiso_gene_15692|Tiso_gene_19778|Tiso_gene_334|Tiso_gene_12478|Tiso_gene_20565|Tiso_gene_12479|Tiso_gene_12375|Tiso_gene_8353}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:56, 21 March 2018

Gene Tiso_gene_7066

  • right end position:
    • 11382
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 9953
  • centisome position:
    • 86.23289
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7066&oldid=44778"