Difference between revisions of "RME298"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.1.6-RXN 2.8.1.6-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** biotin_synthase * ec nu...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME298 RME298] == * direction: ** REVERSIBLE * common name: ** RME298 * Synonym(s): == Reaction Fo...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.1.6-RXN 2.8.1.6-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RME298 RME298] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** biotin_synthase
+
** RME298
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.8.1.6 EC-2.8.1.6]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[DETHIOBIOTIN]][c] '''=>''' 1 [[BIOTIN]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[MET]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c]
+
** 1.0 [[NADH-P-OR-NOP]][c] '''<=>''' 1.0 [[NADPH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a sulfurated [sulfur carrier][c] '''+''' 2 S-adenosyl-L-methionine[c] '''+''' 2 a reduced [2Fe-2S] ferredoxin[c] '''+''' 1 dethiobiotin[c] '''=>''' 1 biotin[c] '''+''' 2 5'-deoxyadenosine[c] '''+''' 1 an unsulfurated [sulfur carrier][c] '''+''' 2 L-methionine[c] '''+''' 2 an oxidized [2Fe-2S] ferredoxin[c]
+
** 1.0 NAD(P)H[c] '''<=>''' 1.0 NADPH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_10345]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[manual]]
−
** Source: [[orthology-esiliculosus]]
+
** Source: [[manual-primary_network]]
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22060 22060]
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{{#set: common name=RME298}}
−
* LIGAND-RXN:
+
{{#set: in pathway=}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01078 R01078]
+
{{#set: reconstruction category=manual}}
−
* UNIPROT:
+
{{#set: reconstruction source=manual-primary_network}}
−
** [http://www.uniprot.org/uniprot/Q9JRW7 Q9JRW7]
+
−
** [http://www.uniprot.org/uniprot/Q9PLZ3 Q9PLZ3]
+
−
** [http://www.uniprot.org/uniprot/P53557 P53557]
+
−
** [http://www.uniprot.org/uniprot/O67104 O67104]
+
−
** [http://www.uniprot.org/uniprot/P44987 P44987]
+
−
** [http://www.uniprot.org/uniprot/Q58692 Q58692]
+
−
** [http://www.uniprot.org/uniprot/P0A506 P0A506]
+
−
** [http://www.uniprot.org/uniprot/Q9Z6L5 Q9Z6L5]
+
−
** [http://www.uniprot.org/uniprot/Q9JUE3 Q9JUE3]
+
−
** [http://www.uniprot.org/uniprot/P46396 P46396]
+
−
** [http://www.uniprot.org/uniprot/Q47862 Q47862]
+
−
** [http://www.uniprot.org/uniprot/P19206 P19206]
+
−
** [http://www.uniprot.org/uniprot/P32451 P32451]
+
−
** [http://www.uniprot.org/uniprot/P54967 P54967]
+
−
** [http://www.uniprot.org/uniprot/P46715 P46715]
+
−
** [http://www.uniprot.org/uniprot/P73538 P73538]
+
−
** [http://www.uniprot.org/uniprot/P12996 P12996]
+
−
** [http://www.uniprot.org/uniprot/O59778 O59778]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=biotin_synthase}}
+
−
{{#set: ec number=EC-2.8.1.6}}
+
−
{{#set: gene associated=Tiso_gene_10345}}
+
−
{{#set: in pathway=PWY0-1507|PWY-7380}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:57, 21 March 2018

Reaction RME298

  • direction:
    • REVERSIBLE
  • common name:
    • RME298
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 NAD(P)H[c] <=> 1.0 NADPH[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RME298&oldid=44819"