Difference between revisions of "ISOCHORSYN-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_66 == * left end position: ** 44448 * transcription direction: ** NEGATIVE * right end position: ** 46625 * centisome position: ** 84.36716...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCHORSYN-RXN ISOCHORSYN-RXN] == * direction: ** REVERSIBLE * common name: ** isochorismate_syntha...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_66 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCHORSYN-RXN ISOCHORSYN-RXN] ==
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* left end position:
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* direction:
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** 44448
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** REVERSIBLE
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* transcription direction:
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* common name:
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** NEGATIVE
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** isochorismate_synthase
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* right end position:
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* ec number:
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** 46625
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** [http://enzyme.expasy.org/EC/5.4.4.2 EC-5.4.4.2]
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* centisome position:
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** 84.367165   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CHORISMATE]][c] '''<=>''' 1 [[ISOCHORISMATE]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 chorismate[c] '''<=>''' 1 isochorismate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_14767]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_17551]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[PWY-5837]], 1,4-dihydroxy-2-naphthoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5837 PWY-5837]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5901]], 2,3-dihydroxybenzoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5901 PWY-5901]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6406]], salicylate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6406 PWY-6406]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=44448}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18985 18985]
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{{#set: right end position=46625}}
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* LIGAND-RXN:
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{{#set: centisome position=84.367165    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01717 R01717]
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P23973 P23973]
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** [http://www.uniprot.org/uniprot/P44613 P44613]
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** [http://www.uniprot.org/uniprot/P74053 P74053]
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** [http://www.uniprot.org/uniprot/P0AEJ2 P0AEJ2]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=isochorismate_synthase}}
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{{#set: ec number=EC-5.4.4.2}}
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{{#set: gene associated=Tiso_gene_14767|Tiso_gene_17551}}
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{{#set: in pathway=PWY-5837|PWY-5901|PWY-6406}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:57, 21 March 2018

Reaction ISOCHORSYN-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • isochorismate_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 chorismate[c] <=> 1 isochorismate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5837, 1,4-dihydroxy-2-naphthoate biosynthesis: PWY-5837
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5901, 2,3-dihydroxybenzoate biosynthesis: PWY-5901
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6406, salicylate biosynthesis I: PWY-6406
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ISOCHORSYN-RXN&oldid=44835"