Difference between revisions of "PPPGO"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13677 RXN-13677] == * direction: ** LEFT-TO-RIGHT * common name: ** aminopeptidase_n ** membran...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PPPGO PPPGO] == * direction: ** LEFT-TO-RIGHT * common name: ** protoporphyrinogen IX oxidase * Syn...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13677 RXN-13677] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PPPGO PPPGO] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** aminopeptidase_n
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** protoporphyrinogen IX oxidase
** membrane_aminopeptidase_i
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* ec number:
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** [http://enzyme.expasy.org/EC/3.4.11.2 EC-3.4.11.2]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CPD-14705]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[CPD-14706]][c]
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** 1.0 [[PROTOPORPHYRINOGEN]][h] '''+''' 3.0 [[OXYGEN-MOLECULE]][h] '''=>''' 3.0 [[HYDROGEN-PEROXIDE]][h] '''+''' 1.0 [[PROTOPORPHYRIN_IX]][h]
 
* With common name(s):
 
* With common name(s):
** 1 4-hydroxy-2-nonenal-[Cys-Gly] conjugate[c] '''+''' 1 H2O[c] '''=>''' 1 glycine[c] '''+''' 1 4-hydroxy-2-nonenal-[L-Cys] conjugate[c]
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** 1.0 protoporphyrinogen IX[h] '''+''' 3.0 oxygen[h] '''=>''' 3.0 hydrogen peroxide[h] '''+''' 1.0 protoporphyrin IX[h]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_860]]
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* Gene: [[Tiso_gene_15401]]
** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16906]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
 
== Pathways  ==
* [[PWY-7112]], 4-hydroxy-2-nonenal detoxification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7112 PWY-7112]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[orthology]]
** [[pantograph]]:
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** Source: [[orthology-creinhardtii]]
*** [[esiliculosus]]
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*** Tool: [[pantograph]]
* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=aminopeptidase_n}}
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{{#set: common name=protoporphyrinogen IX oxidase}}
{{#set: common name=membrane_aminopeptidase_i}}
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{{#set: gene associated=Tiso_gene_15401}}
{{#set: ec number=EC-3.4.11.2}}
+
{{#set: in pathway=}}
{{#set: gene associated=Tiso_gene_860|Tiso_gene_16906}}
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{{#set: in pathway=PWY-7112}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-creinhardtii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=esiliculosus}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 19:57, 21 March 2018

Reaction PPPGO

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • protoporphyrinogen IX oxidase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links