Difference between revisions of "RXN-7785"

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(Created page with "Category:Gene == Gene Tiso_gene_2556 == * left end position: ** 22961 * transcription direction: ** POSITIVE * right end position: ** 25186 * centisome position: ** 91.151...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7785 RXN-7785] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_2556 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7785 RXN-7785] ==
* left end position:
+
* direction:
** 22961
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** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** POSITIVE
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** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
* right end position:
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** 25186
+
* centisome position:
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** 91.15125   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[3.1.1.64-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-7088]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[SUC]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7090]][c]
***ec-number
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* With common name(s):
* [[CARBOXYLESTERASE-RXN]]
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** 1 oxygen[c] '''+''' 1 (2R,3S,4S)-leucodelphinidin[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 succinate[c] '''+''' 2 H2O[c] '''+''' 1 CO2[c] '''+''' 1 H+[c] '''+''' 1 delphinidin[c]
** in-silico_annotation
+
 
***ec-number
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== Genes associated with this reaction  ==
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
** in-silico_annotation
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* Gene: [[Tiso_gene_3330]]
***ec-number
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** Source: [[orthology-esiliculosus]]
* [[RXN-10711]]
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== Pathways  ==
** in-silico_annotation
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* [[PWY-5153]], anthocyanin biosynthesis (delphinidin 3-O-glucoside): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5153 PWY-5153]
***ec-number
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** '''1''' reactions found over '''2''' reactions in the full pathway
* [[RXN-10767]]
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== Reconstruction information  ==
** in-silico_annotation
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* Category: [[orthology]]
***ec-number
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** Source: [[orthology-esiliculosus]]
* [[RXN-12252]]
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*** Tool: [[pantograph]]
** in-silico_annotation
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***ec-number
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* [[RXN-12575]]
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** in-silico_annotation
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***ec-number
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* [[RXNQT-4366]]
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** in-silico_annotation
+
***ec-number
+
== Pathways associated ==
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* [[PWY-6857]]
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* [[PWY-6303]]
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== External links  ==
 
== External links  ==
{{#set: left end position=22961}}
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* LIGAND-RXN:
{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05037 R05037]
{{#set: right end position=25186}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=91.15125    }}
+
{{#set: ec number=EC-1.14.11}}
{{#set: reaction associated=3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXNQT-4366}}
+
{{#set: gene associated=Tiso_gene_3330}}
{{#set: pathway associated=PWY-6857|PWY-6303}}
+
{{#set: in pathway=PWY-5153}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:57, 21 March 2018

Reaction RXN-7785

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5153, anthocyanin biosynthesis (delphinidin 3-O-glucoside): PWY-5153
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links