Difference between revisions of "RXN-8025"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP-D-GALACTURONATE UDP-D-GALACTURONATE] == * smiles: ** C(OP(=O)([O-])OP(=O)([O-])OC1(OC(C(=O)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8025 RXN-8025] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** β-carotene 3,3′-mon...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP-D-GALACTURONATE UDP-D-GALACTURONATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8025 RXN-8025] ==
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* smiles:
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* direction:
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** C(OP(=O)([O-])OP(=O)([O-])OC1(OC(C(=O)[O-])C(O)C(O)C(O)1))C2(OC(C(O)C(O)2)N3(C=CC(=O)NC(=O)3))
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** LEFT-TO-RIGHT
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* common name:
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** UDP-α-D-galacturonate
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* inchi key:
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** InChIKey=HDYANYHVCAPMJV-GXNRKQDOSA-K
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* molecular weight:
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** 577.265   
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* Synonym(s):
 
* Synonym(s):
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** β-carotene 3,3′-monooxygenase
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** CrtZ
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[UDPGALor]]
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** 1 [[NADH]][c] '''+''' 1 [[CPD1F-129]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-7409]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[UDP-GLUCURONATE-4-EPIMERASE-RXN]]
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** 1 NADH[c] '''+''' 1 all-trans-β-carotene[c] '''+''' 1 oxygen[c] '''+''' 1 H+[c] '''=>''' 1 β-cryptoxanthin[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_10837]]
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** Source: [[orthology-synechocystis]]
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== Pathways  ==
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* [[PWY-5288]], astaxanthin biosynthesis (bacteria, fungi, algae): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5288 PWY-5288]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5944]], zeaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5944 PWY-5944]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7638]], echinenone and zeaxanthin biosynthesis (Synechocystis): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7638 PWY-7638]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244587 25244587]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30326 30326]
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* HMDB : HMDB12302
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R07558 R07558]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57635 57635]
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=β-carotene 3,3′-monooxygenase|CrtZ}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00617 C00617]
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{{#set: gene associated=Tiso_gene_10837}}
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{{#set: smiles=C(OP(=O)([O-])OP(=O)([O-])OC1(OC(C(=O)[O-])C(O)C(O)C(O)1))C2(OC(C(O)C(O)2)N3(C=CC(=O)NC(=O)3))}}
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{{#set: in pathway=PWY-5288|PWY-5944|PWY-7638}}
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{{#set: common name=UDP-α-D-galacturonate}}
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{{#set: reconstruction category=orthology}}
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{{#set: inchi key=InChIKey=HDYANYHVCAPMJV-GXNRKQDOSA-K}}
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{{#set: reconstruction source=orthology-synechocystis}}
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{{#set: molecular weight=577.265    }}
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{{#set: reconstruction tool=pantograph}}
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{{#set: produced by=UDPGALor}}
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{{#set: reversible reaction associated=UDP-GLUCURONATE-4-EPIMERASE-RXN}}
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Latest revision as of 20:57, 21 March 2018

Reaction RXN-8025

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):
    • β-carotene 3,3′-monooxygenase
    • CrtZ

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADH[c] + 1 all-trans-β-carotene[c] + 1 oxygen[c] + 1 H+[c] => 1 β-cryptoxanthin[c] + 1 NAD+[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5288, astaxanthin biosynthesis (bacteria, fungi, algae): PWY-5288
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5944, zeaxanthin biosynthesis: PWY-5944
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7638, echinenone and zeaxanthin biosynthesis (Synechocystis): PWY-7638
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-8025&oldid=44907"