Difference between revisions of "RXN-8025"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP-D-GALACTURONATE UDP-D-GALACTURONATE] == * smiles: ** C(OP(=O)([O-])OP(=O)([O-])OC1(OC(C(=O)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8025 RXN-8025] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** β-carotene 3,3′-mon...")
 
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP-D-GALACTURONATE UDP-D-GALACTURONATE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8025 RXN-8025] ==
−
* smiles:
+
* direction:
−
** C(OP(=O)([O-])OP(=O)([O-])OC1(OC(C(=O)[O-])C(O)C(O)C(O)1))C2(OC(C(O)C(O)2)N3(C=CC(=O)NC(=O)3))
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** UDP-α-D-galacturonate
+
−
* inchi key:
+
−
** InChIKey=HDYANYHVCAPMJV-GXNRKQDOSA-K
+
−
* molecular weight:
+
−
** 577.265   
+
 
* Synonym(s):
 
* Synonym(s):
 +
** β-carotene 3,3′-monooxygenase
 +
** CrtZ
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[UDPGALor]]
+
** 1 [[NADH]][c] '''+''' 1 [[CPD1F-129]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-7409]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
−
* [[UDP-GLUCURONATE-4-EPIMERASE-RXN]]
+
** 1 NADH[c] '''+''' 1 all-trans-β-carotene[c] '''+''' 1 oxygen[c] '''+''' 1 H+[c] '''=>''' 1 β-cryptoxanthin[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_10837]]
 +
** Source: [[orthology-synechocystis]]
 +
== Pathways  ==
 +
* [[PWY-5288]], astaxanthin biosynthesis (bacteria, fungi, algae): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5288 PWY-5288]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5944]], zeaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5944 PWY-5944]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7638]], echinenone and zeaxanthin biosynthesis (Synechocystis): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7638 PWY-7638]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* RHEA:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244587 25244587]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30326 30326]
−
* HMDB : HMDB12302
+
* LIGAND-RXN:
−
* CHEBI:
+
** [http://www.genome.jp/dbget-bin/www_bget?R07558 R07558]
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57635 57635]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* LIGAND-CPD:
+
{{#set: common name=β-carotene 3,3′-monooxygenase|CrtZ}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C00617 C00617]
+
{{#set: gene associated=Tiso_gene_10837}}
−
{{#set: smiles=C(OP(=O)([O-])OP(=O)([O-])OC1(OC(C(=O)[O-])C(O)C(O)C(O)1))C2(OC(C(O)C(O)2)N3(C=CC(=O)NC(=O)3))}}
+
{{#set: in pathway=PWY-5288|PWY-5944|PWY-7638}}
−
{{#set: common name=UDP-α-D-galacturonate}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: inchi key=InChIKey=HDYANYHVCAPMJV-GXNRKQDOSA-K}}
+
{{#set: reconstruction source=orthology-synechocystis}}
−
{{#set: molecular weight=577.265    }}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: produced by=UDPGALor}}
+
−
{{#set: reversible reaction associated=UDP-GLUCURONATE-4-EPIMERASE-RXN}}
+

Latest revision as of 19:57, 21 March 2018

Reaction RXN-8025

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):
    • β-carotene 3,3′-monooxygenase
    • CrtZ

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADH[c] + 1 all-trans-β-carotene[c] + 1 oxygen[c] + 1 H+[c] => 1 β-cryptoxanthin[c] + 1 NAD+[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5288, astaxanthin biosynthesis (bacteria, fungi, algae): PWY-5288
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5944, zeaxanthin biosynthesis: PWY-5944
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7638, echinenone and zeaxanthin biosynthesis (Synechocystis): PWY-7638
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-8025&oldid=44907"