Difference between revisions of "RXN0-6427"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12321 CPD-12321] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CC=CC=C(CCC=C(CCC=C(CCC=C(C)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6427 RXN0-6427] == * direction: ** LEFT-TO-RIGHT * common name: ** ca2+-activated_spot-like_pr...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12321 CPD-12321] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6427 RXN0-6427] ==
* smiles:
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* direction:
** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CC=CC=C(CCC=C(CCC=C(CCC=C(C)C)C)C)C
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** LEFT-TO-RIGHT
* inchi key:
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** InChIKey=YVLPJIGOMTXXLP-BHLJUDRVSA-N
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* common name:
 
* common name:
** 15-cis-phytoene
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** ca2+-activated_spot-like_protein
* molecular weight:
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* ec number:
** 544.946   
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** [http://enzyme.expasy.org/EC/3.1.7.2 EC-3.1.7.2]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
== Reaction(s) known to produce the compound ==
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* With identifiers:
* [[RXNARA-8002]]
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** 1 [[GDP-TP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[GTP]][c]
== Reaction(s) of unknown directionality ==
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* With common name(s):
* [[RXN-13323]]
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** 1 pppGpp[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 GTP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_6799]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* LIGAND-CPD:
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* RHEA:
** [http://www.genome.jp/dbget-bin/www_bget?C05421 C05421]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33055 33055]
* CHEMSPIDER:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.chemspider.com/Chemical-Structure.8138988.html 8138988]
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{{#set: common name=ca2+-activated_spot-like_protein}}
* CHEBI:
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{{#set: ec number=EC-3.1.7.2}}
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=27787 27787]
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{{#set: gene associated=Tiso_gene_6799}}
* PUBCHEM:
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{{#set: in pathway=PPGPPMET-PWY}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=9963391 9963391]
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{{#set: reconstruction category=annotation}}
{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CC=CC=C(CCC=C(CCC=C(CCC=C(C)C)C)C)C}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
{{#set: inchi key=InChIKey=YVLPJIGOMTXXLP-BHLJUDRVSA-N}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: common name=15-cis-phytoene}}
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{{#set: molecular weight=544.946    }}
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{{#set: produced by=RXNARA-8002}}
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{{#set: consumed or produced by=RXN-13323}}
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Latest revision as of 20:58, 21 March 2018

Reaction RXN0-6427

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ca2+-activated_spot-like_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 pppGpp[c] + 1 H2O[c] => 1 H+[c] + 1 diphosphate[c] + 1 GTP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links