Difference between revisions of "L-GLUTAMATE GAMMA-SEMIALDEHYDE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1225 RXN-1225] == * direction: ** LEFT-TO-RIGHT * common name: ** digalactosyldiacylglycerol_sy...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-GLUTAMATE_GAMMA-SEMIALDEHYDE L-GLUTAMATE_GAMMA-SEMIALDEHYDE] == * smiles: ** C(CC([N+])C([O-]...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1225 RXN-1225] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-GLUTAMATE_GAMMA-SEMIALDEHYDE L-GLUTAMATE_GAMMA-SEMIALDEHYDE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(CC([N+])C([O-])=O)[CH]=O
 
* common name:
 
* common name:
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** digalactosyldiacylglycerol_synthase
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** L-glutamate-5-semialdehyde
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.4.1.241 EC-2.4.1.241]
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** InChIKey=KABXUUFDPUOJMW-BYPYZUCNSA-N
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* molecular weight:
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** 131.131   
 
* Synonym(s):
 
* Synonym(s):
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** glutamic γ-semialdehyde
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** L-glutamate γ-semialdehyde
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** glutamate-semialdehyde
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-14116]]
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** 1 [[D-Galactosyl-12-diacyl-glycerols]][c] '''+''' 1 [[CPD-14553]][c] '''=>''' 1 [[Galactosyl-galactosyl-diacyl-glycerols]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[G5DH]]
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** 1 a 1,2-diacyl-3-O-(β-D-galactopyranosyl)-sn-glycerol[c] '''+''' 1 UDP-α-D-galactose[c] '''=>''' 1 an α,β-digalactosyldiacylglycerol[c] '''+''' 1 H+[c] '''+''' 1 UDP[c]
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* [[GLUTSEMIALDEHYDROG-RXN]]
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* [[G5DHm]]
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== Genes associated with this reaction  ==
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== Reaction(s) of unknown directionality ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN]]
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* Gene: [[Tiso_gene_2142]]
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* [[SPONTPRO-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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*** Assignment: EC-NUMBER
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* [[PROLINE-MULTI]]
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* Gene: [[Tiso_gene_106]]
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* [[ORNITHINE-GLU-AMINOTRANSFORASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_11479]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-401]], galactolipid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-401 PWY-401]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7666]], galactolipid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7666 PWY-7666]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* BIGG : glu5sa
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10520 10520]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=49791979 49791979]
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** [http://www.genome.jp/dbget-bin/www_bget?R04469 R04469]
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* HMDB : HMDB02104
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=digalactosyldiacylglycerol_synthase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01165 C01165]
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{{#set: ec number=EC-2.4.1.241}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_2142|Tiso_gene_106|Tiso_gene_11479}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58066 58066]
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{{#set: in pathway=PWY-401|PWY-7666}}
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* METABOLIGHTS : MTBLC58066
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: smiles=C(CC([N+])C([O-])=O)[CH]=O}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: common name=L-glutamate-5-semialdehyde}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: inchi key=InChIKey=KABXUUFDPUOJMW-BYPYZUCNSA-N}}
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{{#set: molecular weight=131.131    }}
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{{#set: common name=glutamic γ-semialdehyde|L-glutamate γ-semialdehyde|glutamate-semialdehyde}}
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{{#set: consumed by=RXN-14116}}
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{{#set: produced by=G5DH|GLUTSEMIALDEHYDROG-RXN|G5DHm}}
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{{#set: reversible reaction associated=ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN|SPONTPRO-RXN|ORNITHINE-GLU-AMINOTRANSFERASE-RXN|PROLINE-MULTI|ORNITHINE-GLU-AMINOTRANSFORASE-RXN}}

Latest revision as of 19:58, 21 March 2018

Metabolite L-GLUTAMATE_GAMMA-SEMIALDEHYDE

  • smiles:
    • C(CC([N+])C([O-])=O)[CH]=O
  • common name:
    • L-glutamate-5-semialdehyde
  • inchi key:
    • InChIKey=KABXUUFDPUOJMW-BYPYZUCNSA-N
  • molecular weight:
    • 131.131
  • Synonym(s):
    • glutamic γ-semialdehyde
    • L-glutamate γ-semialdehyde
    • glutamate-semialdehyde

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • BIGG : glu5sa
  • PUBCHEM:
  • HMDB : HMDB02104
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC58066
"C(CC([N+])C([O-])=O)[CH]=O" cannot be used as a page name in this wiki.




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