Difference between revisions of "3.1.1.64-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_15962 == * left end position: ** 307 * transcription direction: ** POSITIVE * right end position: ** 2824 * centisome position: ** 6.562634...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.1.64-RXN 3.1.1.64-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** all-trans-retinyl-pal...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_15962 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.1.64-RXN 3.1.1.64-RXN] ==
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* left end position:
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* direction:
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** 307
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** all-trans-retinyl-palmitate hydrolase
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* right end position:
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** ORF
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** 2824
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** alpha_beta_hydrolase_fold_protein
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* centisome position:
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** alpha_beta_hydrolase
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** 6.562634   
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** serine_esterase
 +
** sialate_o-acetylesterase-like_protein
 +
** lysophospholipase
 +
** protein_chloroplastic
 +
** para-nitrobenzyl_esterase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PEROXID-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[WATER]][c] '''+''' 1 [[CHOCOLA_A]][c] '''=>''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-13524]][c]
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***ec-number
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* With common name(s):
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* [[RXN-12440]]
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** 1 H2O[c] '''+''' 1 all-trans-retinyl palmitate[c] '''=>''' 1 palmitate[c] '''+''' 1 H+[c] '''+''' 1 all-trans-retinol[c]
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** in-silico_annotation
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***automated-name-match
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== Genes associated with this reaction  ==
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* [[RXN-14240]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* Gene: [[Tiso_gene_1537]]
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***ec-number
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-15288]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** in-silico_annotation
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** Source: [[orthology-esiliculosus]]
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***ec-number
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* Gene: [[Tiso_gene_4650]]
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* [[RXN-17352]]
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** Source: [[annotation-in-silico_annotation]]
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** in-silico_annotation
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*** Assignment: EC-NUMBER
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***ec-number
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** Source: [[orthology-esiliculosus]]
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* [[RXN-3521]]
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* Gene: [[Tiso_gene_12686]]
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** in-silico_annotation
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** Source: [[annotation-in-silico_annotation]]
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***automated-name-match
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*** Assignment: EC-NUMBER
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* [[RXN-8635]]
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* Gene: [[Tiso_gene_10066]]
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** in-silico_annotation
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** Source: [[annotation-in-silico_annotation]]
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***ec-number
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*** Assignment: EC-NUMBER
−
== Pathways associated ==
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* Gene: [[Tiso_gene_17029]]
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* [[PWY-7214]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-6824]]
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*** Assignment: EC-NUMBER
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* [[PWY-6960]]
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* Gene: [[Tiso_gene_11351]]
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* [[PWY-5461]]
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-7445]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY-5469]]
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* Gene: [[Tiso_gene_1538]]
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* [[PWY-5466]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-6959]]
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* Gene: [[Tiso_gene_19778]]
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* [[PWY-6961]]
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-2261]]
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*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16518]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_4606]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_1922]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_2556]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9429]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=307}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13933 13933]
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{{#set: right end position=2824}}
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* LIGAND-RXN:
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{{#set: centisome position=6.562634    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02368 R02368]
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{{#set: reaction associated=PEROXID-RXN|RXN-12440|RXN-14240|RXN-15288|RXN-17352|RXN-3521|RXN-8635}}
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{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: pathway associated=PWY-7214|PWY-6824|PWY-6960|PWY-5461|PWY-7445|PWY-5469|PWY-5466|PWY-6959|PWY-6961|PWY-2261}}
+
{{#set: common name=all-trans-retinyl-palmitate hydrolase}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=alpha_beta_hydrolase_fold_protein}}
 +
{{#set: common name=alpha_beta_hydrolase}}
 +
{{#set: common name=serine_esterase}}
 +
{{#set: common name=sialate_o-acetylesterase-like_protein}}
 +
{{#set: common name=lysophospholipase}}
 +
{{#set: common name=protein_chloroplastic}}
 +
{{#set: common name=para-nitrobenzyl_esterase}}
 +
{{#set: ec number=EC-3.1.1.1}}
 +
{{#set: gene associated=Tiso_gene_1537|Tiso_gene_4650|Tiso_gene_12686|Tiso_gene_10066|Tiso_gene_17029|Tiso_gene_11351|Tiso_gene_1538|Tiso_gene_19778|Tiso_gene_16518|Tiso_gene_4606|Tiso_gene_1922|Tiso_gene_2556|Tiso_gene_9429}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:58, 21 March 2018

Reaction 3.1.1.64-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • all-trans-retinyl-palmitate hydrolase
    • ORF
    • alpha_beta_hydrolase_fold_protein
    • alpha_beta_hydrolase
    • serine_esterase
    • sialate_o-acetylesterase-like_protein
    • lysophospholipase
    • protein_chloroplastic
    • para-nitrobenzyl_esterase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 all-trans-retinyl palmitate[c] => 1 palmitate[c] + 1 H+[c] + 1 all-trans-retinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links









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