Difference between revisions of "KETOISOCAPROATE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9699 CPD-9699] == * smiles: ** C=C1(C(CC([N+])C([O-])=O)C1) * inchi key: ** InChIKey=OOJZCX...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-methy...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9699 CPD-9699] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] ==
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* smiles:
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* direction:
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** C=C1(C(CC([N+])C([O-])=O)C1)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=OOJZCXFXPZGUBJ-UHFFFAOYSA-N
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* common name:
 
* common name:
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** hypoglycin A
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** 4-methyl-2-oxopentanoate dehydrogenase (lipoamide)
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* molecular weight:
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** 2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial
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** 141.169   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.2.4.4 EC-1.2.4.4]
 
* Synonym(s):
 
* Synonym(s):
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** hypoglycine
 
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** hypoglycine A
 
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** hypoglycin
 
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** L-β-(methylenecyclopropyl)-alanine
 
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** 2-amino-3-(2-methylidenecyclopropyl)propanoic acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-9157]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[PROTON]][c] '''+''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[BCAA-dehydrogenase-3MB-DH-lipoyl]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 H+[c] '''+''' 1 4-methyl-2-oxopentanoate[c] '''+''' 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''=>''' 1 CO2[c] '''+''' 1 a [apo BCAA dehydrogenase E2 protein] N6-S-[3-methylbutanoyl]dihydrolipoyl-L-lysine[c]
 +
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_18084]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_3260]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244430 25244430]
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** [http://www.uniprot.org/uniprot/P21839 P21839]
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* Wikipedia : Hypoglycin
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** [http://www.uniprot.org/uniprot/P21953 P21953]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P37940 P37940]
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** [http://www.genome.jp/dbget-bin/www_bget?C08287 C08287]
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** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
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* HMDB : HMDB29427
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** [http://www.uniprot.org/uniprot/P37941 P37941]
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{{#set: smiles=C=C1(C(CC([N+])C([O-])=O)C1)}}
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** [http://www.uniprot.org/uniprot/P11178 P11178]
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{{#set: inchi key=InChIKey=OOJZCXFXPZGUBJ-UHFFFAOYSA-N}}
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** [http://www.uniprot.org/uniprot/P12694 P12694]
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{{#set: common name=hypoglycin A}}
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** [http://www.uniprot.org/uniprot/P09061 P09061]
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{{#set: molecular weight=141.169    }}
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** [http://www.uniprot.org/uniprot/P09060 P09060]
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{{#set: common name=hypoglycine|hypoglycine A|hypoglycin|L-β-(methylenecyclopropyl)-alanine|2-amino-3-(2-methylidenecyclopropyl)propanoic acid}}
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** [http://www.uniprot.org/uniprot/P11960 P11960]
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{{#set: consumed by=RXN-9157}}
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** [http://www.uniprot.org/uniprot/O84344 O84344]
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** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
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** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
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** [http://www.uniprot.org/uniprot/P35738 P35738]
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** [http://www.uniprot.org/uniprot/P50136 P50136]
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** [http://www.uniprot.org/uniprot/O48615 O48615]
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** [http://www.uniprot.org/uniprot/O03849 O03849]
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** [http://www.uniprot.org/uniprot/Q53592 Q53592]
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** [http://www.uniprot.org/uniprot/Q53593 Q53593]
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** [http://www.uniprot.org/uniprot/O82450 O82450]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=4-methyl-2-oxopentanoate dehydrogenase (lipoamide)}}
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{{#set: common name=2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial}}
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{{#set: ec number=EC-1.2.4.4}}
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{{#set: gene associated=Tiso_gene_18084|Tiso_gene_3260}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:58, 21 March 2018

Reaction KETOISOCAPROATE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 4-methyl-2-oxopentanoate dehydrogenase (lipoamide)
    • 2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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