Difference between revisions of "KETOISOCAPROATE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_18839 == * right end position: ** 1765 * transcription direction: ** POSITIVE * left end position: ** 40 * centisome position: ** 1.447178...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-methy...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_18839 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] ==
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* right end position:
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* direction:
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** 1765
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** 4-methyl-2-oxopentanoate dehydrogenase (lipoamide)
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* left end position:
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** 2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial
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** 40
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.2.4.4 EC-1.2.4.4]
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** 1.447178   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[OHACYL-COA-DEHYDROG-RXN]]
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* With identifiers:
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** Source: [[annotation-in-silico_annotation]]
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** 1 [[PROTON]][c] '''+''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[BCAA-dehydrogenase-3MB-DH-lipoyl]][c]
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*** Assignment: ec-number
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* With common name(s):
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* Reaction: [[RXN-10698]]
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** 1 H+[c] '''+''' 1 4-methyl-2-oxopentanoate[c] '''+''' 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''=>''' 1 CO2[c] '''+''' 1 a [apo BCAA dehydrogenase E2 protein] N6-S-[3-methylbutanoyl]dihydrolipoyl-L-lysine[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-10702]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_18084]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-10703]]
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* Gene: [[Tiso_gene_3260]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-11245]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-11662]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-12490]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-12570]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-12705]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-12750]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-16133]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-17777]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-17781]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-17786]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17790]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17793]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17794]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17797]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17798]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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−
* Reaction: [[RXN-905]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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* Reaction: [[RXN0-2044]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[P162-PWY]]
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* [[PWY-5177]]
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* [[PWY-6583]]
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* [[PWY-6883]]
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* [[PWY-5136]]
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* [[PWY-7778]]
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* [[PWY-7779]]
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* [[PWY-7094]]
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* [[PWY66-391]]
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* [[PWY-5789]]
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* [[PWY-81]]
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* [[CENTFERM-PWY]]
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* [[PWY-6945]]
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* [[PWY0-321]]
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* [[PWY-7007]]
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* [[PWY-6435]]
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* [[PWY-7216]]
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* [[PWY-1361]]
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* [[PWY-6946]]
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* [[FAO-PWY]]
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* [[PWY-6944]]
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* [[PWY-735]]
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* [[PWY-7401]]
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* [[PWY-6863]]
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== External links  ==
 
== External links  ==
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{{#set: right end position=1765}}
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* UNIPROT:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P21839 P21839]
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{{#set: left end position=40}}
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** [http://www.uniprot.org/uniprot/P21953 P21953]
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{{#set: centisome position=1.447178    }}
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** [http://www.uniprot.org/uniprot/P37940 P37940]
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{{#set: reaction associated=OHACYL-COA-DEHYDROG-RXN|RXN-10698|RXN-10702|RXN-10703|RXN-11245|RXN-11662|RXN-12490|RXN-12570|RXN-12705|RXN-12750|RXN-16133|RXN-17777|RXN-17781|RXN-17786|RXN-17790|RXN-17793|RXN-17794|RXN-17797|RXN-17798|RXN-905|RXN0-2044}}
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** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
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{{#set: pathway associated=P162-PWY|PWY-5177|PWY-6583|PWY-6883|PWY-5136|PWY-7778|PWY-7779|PWY-7094|PWY66-391|PWY-5789|PWY-81|CENTFERM-PWY|PWY-6945|PWY0-321|PWY-7007|PWY-6435|PWY-7216|PWY-1361|PWY-6946|FAO-PWY|PWY-6944|PWY-735|PWY-7401|PWY-6863}}
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** [http://www.uniprot.org/uniprot/P37941 P37941]
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** [http://www.uniprot.org/uniprot/P11178 P11178]
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** [http://www.uniprot.org/uniprot/P12694 P12694]
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** [http://www.uniprot.org/uniprot/P09061 P09061]
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** [http://www.uniprot.org/uniprot/P09060 P09060]
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** [http://www.uniprot.org/uniprot/P11960 P11960]
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** [http://www.uniprot.org/uniprot/O84344 O84344]
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** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
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** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
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** [http://www.uniprot.org/uniprot/P35738 P35738]
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** [http://www.uniprot.org/uniprot/P50136 P50136]
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** [http://www.uniprot.org/uniprot/O48615 O48615]
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** [http://www.uniprot.org/uniprot/O03849 O03849]
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** [http://www.uniprot.org/uniprot/Q53592 Q53592]
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** [http://www.uniprot.org/uniprot/Q53593 Q53593]
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** [http://www.uniprot.org/uniprot/O82450 O82450]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=4-methyl-2-oxopentanoate dehydrogenase (lipoamide)}}
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{{#set: common name=2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial}}
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{{#set: ec number=EC-1.2.4.4}}
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{{#set: gene associated=Tiso_gene_18084|Tiso_gene_3260}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:58, 21 March 2018

Reaction KETOISOCAPROATE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 4-methyl-2-oxopentanoate dehydrogenase (lipoamide)
    • 2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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