Difference between revisions of "Tiso gene 18839"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-27 RXN66-27] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
(Created page with "Category:Gene == Gene Tiso_gene_18839 == * right end position: ** 1765 * transcription direction: ** POSITIVE * left end position: ** 40 * centisome position: ** 1.447178...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-27 RXN66-27] ==
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== Gene Tiso_gene_18839 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1765
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.3.1.21 EC-1.3.1.21]
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** POSITIVE
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* left end position:
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** 40
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* centisome position:
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** 1.447178   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[OHACYL-COA-DEHYDROG-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-8646]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[DESMOSTEROL-CPD]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H+[c] '''+''' 1 7-dehydrodesmosterol[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 desmosterol[c]
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* Reaction: [[RXN-10698]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-10702]]
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* [[Tiso_gene_8982]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-10703]]
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* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4]
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** Source: [[annotation-in-silico_annotation]]
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** '''7''' reactions found over '''22''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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* Reaction: [[RXN-11245]]
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* [[orthology]]:
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]:
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*** Assignment: ec-number
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*** [[esiliculosus]]
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* Reaction: [[RXN-11662]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12490]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12570]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12705]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12750]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16133]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17777]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17781]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17786]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17790]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17793]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17794]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17797]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17798]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-905]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-2044]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[P162-PWY]]
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* [[PWY-5177]]
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* [[PWY-6583]]
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* [[PWY-6883]]
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* [[PWY-5136]]
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* [[PWY-7778]]
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* [[PWY-7779]]
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* [[PWY-7094]]
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* [[PWY66-391]]
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* [[PWY-5789]]
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* [[PWY-81]]
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* [[CENTFERM-PWY]]
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* [[PWY-6945]]
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* [[PWY0-321]]
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* [[PWY-7007]]
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* [[PWY-6435]]
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* [[PWY-7216]]
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* [[PWY-1361]]
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* [[PWY-6946]]
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* [[FAO-PWY]]
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* [[PWY-6944]]
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* [[PWY-735]]
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* [[PWY-7401]]
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* [[PWY-6863]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1765}}
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{{#set: ec number=EC-1.3.1.21}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: gene associated=Tiso_gene_8982}}
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{{#set: left end position=40}}
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{{#set: in pathway=PWY66-4}}
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{{#set: centisome position=1.447178    }}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=OHACYL-COA-DEHYDROG-RXN|RXN-10698|RXN-10702|RXN-10703|RXN-11245|RXN-11662|RXN-12490|RXN-12570|RXN-12705|RXN-12750|RXN-16133|RXN-17777|RXN-17781|RXN-17786|RXN-17790|RXN-17793|RXN-17794|RXN-17797|RXN-17798|RXN-905|RXN0-2044}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: pathway associated=P162-PWY|PWY-5177|PWY-6583|PWY-6883|PWY-5136|PWY-7778|PWY-7779|PWY-7094|PWY66-391|PWY-5789|PWY-81|CENTFERM-PWY|PWY-6945|PWY0-321|PWY-7007|PWY-6435|PWY-7216|PWY-1361|PWY-6946|FAO-PWY|PWY-6944|PWY-735|PWY-7401|PWY-6863}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 19:58, 21 March 2018

Gene Tiso_gene_18839

  • right end position:
    • 1765
  • transcription direction:
    • POSITIVE
  • left end position:
    • 40
  • centisome position:
    • 1.447178
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18839&oldid=44975"