Difference between revisions of "Tiso gene 6282"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6383 RXN-6383] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/4.2.1...")
(Created page with "Category:Gene == Gene Tiso_gene_6282 == * right end position: ** 1318 * transcription direction: ** POSITIVE * left end position: ** 170 * centisome position: ** 1.3759611...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6383 RXN-6383] ==
+
== Gene Tiso_gene_6282 ==
−
* direction:
+
* right end position:
−
** REVERSIBLE
+
** 1318
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/4.2.1.116 EC-4.2.1.116]
+
** POSITIVE
 +
* left end position:
 +
** 170
 +
* centisome position:
 +
** 1.3759611   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3.1.26.3-RXN]]
−
** 1 [[3-HYDROXY-PROPIONYL-COA]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[ACRYLYL-COA]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 3-hydroxypropanoyl-CoA[c] '''<=>''' 1 H2O[c] '''+''' 1 acryloyl-CoA[c]
+
* Reaction: [[RXN-8038]]
−
 
+
** Source: [[orthology-athaliana]]
−
== Genes associated with this reaction  ==
+
* Reaction: [[RXN-8040]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[orthology-athaliana]]
−
* [[Tiso_gene_14257]]
+
* Reaction: [[RXN1F-147]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-athaliana]]
−
** [[pantograph]]-[[creinhardtii]]
+
* Reaction: [[RXN1F-148]]
−
* [[Tiso_gene_16703]]
+
** Source: [[orthology-athaliana]]
−
** [[pantograph]]-[[creinhardtii]]
+
* Reaction: [[RXN1F-150]]
−
* [[Tiso_gene_5857]]
+
** Source: [[orthology-athaliana]]
−
** [[pantograph]]-[[athaliana]]
+
* Reaction: [[RXN1F-151]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-athaliana]]
−
** [[pantograph]]-[[creinhardtii]]
+
== Pathways associated ==
−
** [[pantograph]]-[[creinhardtii]]
+
* [[PWY-5947]]
−
== Pathways  ==
+
* [[PWY-5946]]
−
* [[PWY-7574]], propanoyl-CoA degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7574 PWY-7574]
+
* [[PWY-5943]]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-7591]]
−
* [[PWY-3941]], &beta;-alanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3941 PWY-3941]
+
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
+
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
+
−
** '''8''' reactions found over '''16''' reactions in the full pathway
+
−
* [[PWY-5744]], glyoxylate assimilation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744]
+
−
** '''2''' reactions found over '''11''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[creinhardtii]]
+
−
*** [[esiliculosus]]
+
−
*** [[athaliana]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=1318}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26518 26518]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=170}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03045 R03045]
+
{{#set: centisome position=1.3759611    }}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: reaction associated=3.1.26.3-RXN|RXN-8038|RXN-8040|RXN1F-147|RXN1F-148|RXN1F-150|RXN1F-151}}
−
{{#set: ec number=EC-4.2.1.116}}
+
{{#set: pathway associated=PWY-5947|PWY-5946|PWY-5943|PWY-7591}}
−
{{#set: gene associated=Tiso_gene_14257|Tiso_gene_16703|Tiso_gene_5857}}
+
−
{{#set: in pathway=PWY-7574|PWY-3941|PWY-5743|PWY-5789|PWY-5744}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
+

Latest revision as of 19:59, 21 March 2018

Gene Tiso_gene_6282

  • right end position:
    • 1318
  • transcription direction:
    • POSITIVE
  • left end position:
    • 170
  • centisome position:
    • 1.3759611
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6282&oldid=45069"