Difference between revisions of "RXN-6383"

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(Created page with "Category:Gene == Gene Tiso_gene_16906 == * left end position: ** 288 * transcription direction: ** NEGATIVE * right end position: ** 4049 * centisome position: ** 7.111111...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6383 RXN-6383] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/4.2.1...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_16906 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6383 RXN-6383] ==
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* left end position:
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* direction:
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** 288
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** REVERSIBLE
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* transcription direction:
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* ec number:
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** NEGATIVE
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** [http://enzyme.expasy.org/EC/4.2.1.116 EC-4.2.1.116]
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* right end position:
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** 4049
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* centisome position:
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** 7.111111   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.4.11.2-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[3-HYDROXY-PROPIONYL-COA]][c] '''<=>''' 1 [[ACRYLYL-COA]][c] '''+''' 1 [[WATER]][c]
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***automated-name-match
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* With common name(s):
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* [[LEUKOTRIENE-A4-HYDROLASE-RXN]]
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** 1 3-hydroxypropanoyl-CoA[c] '''<=>''' 1 acryloyl-CoA[c] '''+''' 1 H2O[c]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
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* [[RXN-13677]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* Gene: [[Tiso_gene_5857]]
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***automated-name-match
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** Source: [[orthology-athaliana]]
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* [[RXN-6642]]
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** Source: [[orthology-esiliculosus]]
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** in-silico_annotation
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** Source: [[orthology-creinhardtii]]
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***automated-name-match
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
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* Gene: [[Tiso_gene_16703]]
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* [[PWY-7112]]
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** Source: [[orthology-creinhardtii]]
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* [[PWY-6842]]
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* Gene: [[Tiso_gene_14257]]
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* [[PWY-4061]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY66-375]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* [[PWY-7574]], propanoyl-CoA degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7574 PWY-7574]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-3941]], &beta;-alanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3941 PWY-3941]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
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** '''4''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
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** '''8''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-5744]], glyoxylate assimilation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744]
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** '''2''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=288}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26518 26518]
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{{#set: right end position=4049}}
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* LIGAND-RXN:
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{{#set: centisome position=7.111111    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03045 R03045]
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{{#set: reaction associated=3.4.11.2-RXN|LEUKOTRIENE-A4-HYDROLASE-RXN|RXN-13677|RXN-6642}}
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{{#set: direction=REVERSIBLE}}
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{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY66-375}}
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{{#set: ec number=EC-4.2.1.116}}
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{{#set: gene associated=Tiso_gene_5857|Tiso_gene_16703|Tiso_gene_14257}}
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{{#set: in pathway=PWY-7574|PWY-3941|PWY-5743|PWY-5789|PWY-5744}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:59, 21 March 2018

Reaction RXN-6383

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7574, propanoyl-CoA degradation II: PWY-7574
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-3941, β-alanine biosynthesis II: PWY-3941
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-5743, 3-hydroxypropanoate cycle: PWY-5743
    • 4 reactions found over 11 reactions in the full pathway
  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle: PWY-5789
    • 8 reactions found over 16 reactions in the full pathway
  • PWY-5744, glyoxylate assimilation: PWY-5744
    • 2 reactions found over 11 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-6383&oldid=45125"