Difference between revisions of "PHENDEHYD-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14107 RXN-14107] == * direction: ** LEFT-TO-RIGHT * common name: ** menaquinol-cytochrome c red...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHENDEHYD-RXN PHENDEHYD-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.or...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14107 RXN-14107] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHENDEHYD-RXN PHENDEHYD-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** menaquinol-cytochrome c reductase
+
−
** cytochrome_b6-fcomplexiron-sulfurchloroplastic
+
−
** ubiquinol-cytochrome_c_reductase
+
−
** probable_mitochondrial-processingpeptidasesubunitbeta
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.10.2.2 EC-1.10.2.2]
+
** [http://enzyme.expasy.org/EC/1.2.1.39 EC-1.2.1.39]
 
* Synonym(s):
 
* Synonym(s):
−
** menaquinone:cytochrome c reductase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[Cytochromes-C-Oxidized]][e] '''+''' 1 [[Menaquinols]][c] '''=>''' 1 [[Menaquinones]][c] '''+''' 2 [[Cytochromes-C-Reduced]][e] '''+''' 2 [[PROTON]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[PHENYLACETALDEHYDE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PHENYLACETATE]][c] '''+''' 2 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 an oxidized c-type cytochrome[e] '''+''' 1 a menaquinol[c] '''=>''' 1 a menaquinone[c] '''+''' 2 a reduced c-type cytochrome[e] '''+''' 2 H+[c]
+
** 1 NAD+[c] '''+''' 1 phenylacetaldehyde[c] '''+''' 1 H2O[c] '''<=>''' 1 NADH[c] '''+''' 1 phenylacetate[c] '''+''' 2 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* Gene: [[Tiso_gene_7235]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
* Gene: [[Tiso_gene_4973]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
* Gene: [[Tiso_gene_9627]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: EC-NUMBER
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[Tiso_gene_18330]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
* Gene: [[Tiso_gene_15926]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[ANAPHENOXI-PWY]], L-phenylalanine degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=ANAPHENOXI-PWY ANAPHENOXI-PWY]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6534]], phenylethylamine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6534 PWY-6534]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[2PHENDEG-PWY]], phenylethylamine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=2PHENDEG-PWY 2PHENDEG-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6318]], L-phenylalanine degradation IV (mammalian, via side chain): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6941]], styrene degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6941 PWY-6941]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=menaquinol-cytochrome c reductase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21392 21392]
−
{{#set: common name=cytochrome_b6-fcomplexiron-sulfurchloroplastic}}
+
* LIGAND-RXN:
−
{{#set: common name=ubiquinol-cytochrome_c_reductase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02536 R02536]
−
{{#set: common name=probable_mitochondrial-processingpeptidasesubunitbeta}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-1.10.2.2}}
+
{{#set: ec number=EC-1.2.1.39}}
−
{{#set: common name=menaquinone:cytochrome c reductase}}
+
{{#set: in pathway=ANAPHENOXI-PWY|PWY-6534|2PHENDEG-PWY|PWY-6318|PWY-6941}}
−
{{#set: gene associated=Tiso_gene_7235|Tiso_gene_4973|Tiso_gene_9627|Tiso_gene_18330|Tiso_gene_15926}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 21:00, 21 March 2018

Reaction PHENDEHYD-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • ANAPHENOXI-PWY, L-phenylalanine degradation II (anaerobic): ANAPHENOXI-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6534, phenylethylamine degradation II: PWY-6534
    • 1 reactions found over 2 reactions in the full pathway
  • 2PHENDEG-PWY, phenylethylamine degradation I: 2PHENDEG-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6318, L-phenylalanine degradation IV (mammalian, via side chain): PWY-6318
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-6941, styrene degradation: PWY-6941
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PHENDEHYD-RXN&oldid=45187"