Difference between revisions of "Tiso gene 9874"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.13.11.6-RXN 1.13.11.6-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyanthranila...")
(Created page with "Category:Gene == Gene Tiso_gene_9874 == * right end position: ** 5787 * transcription direction: ** POSITIVE * left end position: ** 3470 * centisome position: ** 38.54699...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.13.11.6-RXN 1.13.11.6-RXN] ==
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== Gene Tiso_gene_9874 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5787
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* common name:
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* transcription direction:
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** 3-hydroxyanthranilate 3,4-dioxygenase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.13.11.6 EC-1.13.11.6]
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** 3470
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* centisome position:
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** 38.54699   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[NADH-DEHYDROG-A-RXN]]
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** 1 [[3-HYDROXY-ANTHRANILATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[2-AMINO-3-3-OXOPROP-2-ENYL-BUT-2-ENEDI]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 3-hydroxyanthranilate[c] '''+''' 1 oxygen[c] '''=>''' 1 aminocarboxymuconate semialdehyde[c] '''+''' 1 H+[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-6692]]
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* [[Tiso_gene_10922]]
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* [[PWY-3781]]
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** EXPERIMENTAL_ANNOTATION
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* [[PWY-5083]]
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***EC-NUMBER
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* [[PWY0-1334]]
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== Pathways ==
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* [[PWY0-1335]]
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* [[PWY-5651]], L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5651 PWY-5651]
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* [[PWY-4302]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6505]], L-tryptophan degradation XII (Geobacillus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6505 PWY-6505]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309]
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** '''9''' reactions found over '''17''' reactions in the full pathway
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* [[PWY-5647]], 2-nitrobenzoate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5647 PWY-5647]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=5787}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17956 17956]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=3470}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02665 R02665]
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{{#set: centisome position=38.54699    }}
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* UNIPROT:
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{{#set: reaction associated=NADH-DEHYDROG-A-RXN}}
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** [http://www.uniprot.org/uniprot/P46952 P46952]
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{{#set: pathway associated=PWY-6692|PWY-3781|PWY-5083|PWY0-1334|PWY0-1335|PWY-4302}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=3-hydroxyanthranilate 3,4-dioxygenase}}
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{{#set: ec number=EC-1.13.11.6}}
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{{#set: gene associated=Tiso_gene_10922}}
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{{#set: in pathway=PWY-5651|PWY-6505|PWY-6309|PWY-5647}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation}}
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Latest revision as of 21:00, 21 March 2018

Gene Tiso_gene_9874

  • right end position:
    • 5787
  • transcription direction:
    • POSITIVE
  • left end position:
    • 3470
  • centisome position:
    • 38.54699
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9874&oldid=45217"