Difference between revisions of "Tiso gene 12348"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN 3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN] == * direction: ** REVERSI...")
(Created page with "Category:Gene == Gene Tiso_gene_12348 == * right end position: ** 3503 * transcription direction: ** POSITIVE * left end position: ** 580 * centisome position: ** 8.147211...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN 3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN] ==
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== Gene Tiso_gene_12348 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 3503
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.1.1.30 EC-1.1.1.30]
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** POSITIVE
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* left end position:
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** 580
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* centisome position:
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** 8.147211   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-15556]]
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** 1 [[NAD]][c] '''+''' 1 [[CPD-335]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[3-KETOBUTYRATE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 NAD+[c] '''+''' 1 (R)-3-hydroxybutanoate[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 acetoacetate[c]
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_7191]]
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* [[PWY-7511]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_12472]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY66-368]], ketolysis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-368 PWY66-368]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=3503}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20521 20521]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=580}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01361 R01361]
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{{#set: centisome position=8.147211    }}
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* UNIPROT:
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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** [http://www.uniprot.org/uniprot/P29147 P29147]
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{{#set: pathway associated=PWY-7511}}
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** [http://www.uniprot.org/uniprot/Q02338 Q02338]
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** [http://www.uniprot.org/uniprot/Q02337 Q02337]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-1.1.1.30}}
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{{#set: gene associated=Tiso_gene_7191|Tiso_gene_12472}}
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{{#set: in pathway=PWY66-367|PWY66-368}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii}}
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Latest revision as of 20:00, 21 March 2018

Gene Tiso_gene_12348

  • right end position:
    • 3503
  • transcription direction:
    • POSITIVE
  • left end position:
    • 580
  • centisome position:
    • 8.147211
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12348&oldid=45226"