Difference between revisions of "RXN-13698"

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(Created page with "Category:Gene == Gene Tiso_gene_1739 == * left end position: ** 11036 * transcription direction: ** POSITIVE * right end position: ** 13019 * centisome position: ** 50.211...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13698 RXN-13698] == * direction: ** REVERSIBLE * common name: ** alanine_aminotransferase_mitoc...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_1739 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13698 RXN-13698] ==
* left end position:
+
* direction:
** 11036
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** REVERSIBLE
* transcription direction:
+
* common name:
** POSITIVE
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** alanine_aminotransferase_mitochondrial
* right end position:
+
** alanine_aminotransferase
** 13019
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* ec number:
* centisome position:
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** [http://enzyme.expasy.org/EC/2.6.1.2 EC-2.6.1.2]
** 50.211567   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[5.99.1.2-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[GLT]][c]
***ec-number
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* With common name(s):
== Pathways associated ==
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** 1 L-alanine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 pyruvate[c] '''+''' 1 L-glutamate[c]
 +
 
 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_10957]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5959]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
 +
** '''7''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=11036}}
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{{#set: direction=REVERSIBLE}}
{{#set: transcription direction=POSITIVE}}
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{{#set: common name=alanine_aminotransferase_mitochondrial}}
{{#set: right end position=13019}}
+
{{#set: common name=alanine_aminotransferase}}
{{#set: centisome position=50.211567    }}
+
{{#set: ec number=EC-2.6.1.2}}
{{#set: reaction associated=5.99.1.2-RXN}}
+
{{#set: gene associated=Tiso_gene_10957|Tiso_gene_5959}}
 +
{{#set: in pathway=PWY-7117|PWY-7115}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:00, 21 March 2018

Reaction RXN-13698

  • direction:
    • REVERSIBLE
  • common name:
    • alanine_aminotransferase_mitochondrial
    • alanine_aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 7 reactions found over 10 reactions in the full pathway
  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type: PWY-7115
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links