Difference between revisions of "RXN-7647"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.55-RXN 3.2.1.55-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** acetyl-_carbox...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7647 RXN-7647] == * direction: ** LEFT-TO-RIGHT * common name: ** atp-dependent_rna_helicase_dh...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.55-RXN 3.2.1.55-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7647 RXN-7647] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ORF
+
** atp-dependent_rna_helicase_dhx30-like
−
** acetyl-_carboxylase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.55 EC-3.2.1.55]
+
** [http://enzyme.expasy.org/EC/5.5.1.6 EC-5.5.1.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** n [[WATER]][c] '''+''' 1 [[1-5-L-Arabinooligosaccharides]][c] '''=>''' n [[CPD-12045]][c]
+
** 1 [[CPD-6993]][c] '''=>''' 1 [[CPD-6991]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** n H2O[c] '''+''' 1 a (1->5)-α-L-arabinan oligosaccharide[c] '''=>''' n α-L-arabinofuranose[c]
+
** 1 pinocembrin chalcone[c] '''=>''' 1 (2S)-pinocembrin[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_10897]]
+
* Gene: [[Tiso_gene_9838]]
−
** Source: [[annotation-experimental_annotation]]
+
** Source: [[orthology-esiliculosus]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
* Gene: [[Tiso_gene_13414]]
−
* Gene: [[Tiso_gene_6300]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_14849]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_6299]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5059]], pinobanksin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5059 PWY-5059]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P82594 P82594]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07990 R07990]
−
** [http://www.uniprot.org/uniprot/Q9KBQ8 Q9KBQ8]
+
−
** [http://www.uniprot.org/uniprot/P42255 P42255]
+
−
** [http://www.uniprot.org/uniprot/P53627 P53627]
+
−
** [http://www.uniprot.org/uniprot/P49943 P49943]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ORF}}
+
{{#set: common name=atp-dependent_rna_helicase_dhx30-like}}
−
{{#set: common name=acetyl-_carboxylase}}
+
{{#set: ec number=EC-5.5.1.6}}
−
{{#set: ec number=EC-3.2.1.55}}
+
{{#set: gene associated=Tiso_gene_9838|Tiso_gene_13414}}
−
{{#set: gene associated=Tiso_gene_10897|Tiso_gene_6300|Tiso_gene_14849|Tiso_gene_6299}}
+
{{#set: in pathway=PWY-5059}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 21:01, 21 March 2018

Reaction RXN-7647

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • atp-dependent_rna_helicase_dhx30-like
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 pinocembrin chalcone[c] => 1 (2S)-pinocembrin[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5059, pinobanksin biosynthesis: PWY-5059
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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