Difference between revisions of "Tiso gene 17967"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLY3KIN-RXN GLY3KIN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
(Created page with "Category:Gene == Gene Tiso_gene_17967 == * right end position: ** 2220 * transcription direction: ** POSITIVE * left end position: ** 159 * centisome position: ** 4.753363...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLY3KIN-RXN GLY3KIN-RXN] ==
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== Gene Tiso_gene_17967 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2220
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.7.1.31 EC-2.7.1.31]
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** POSITIVE
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* left end position:
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** 159
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* centisome position:
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** 4.753363   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACOA120or]]
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** 1 [[ATP]][c] '''+''' 1 [[GLYCERATE]][c] '''=>''' 1 [[G3P]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[orthology-creinhardtii]]
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* With common name(s):
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* Reaction: [[ACOA140or]]
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** 1 ATP[c] '''+''' 1 D-glycerate[c] '''=>''' 1 3-phospho-D-glycerate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[ACOA160or]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[ACOA40or]]
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* [[Tiso_gene_3016]]
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** Source: [[orthology-creinhardtii]]
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[ACOA80or]]
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[orthology-creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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* Reaction: [[LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-181]], photorespiration: [http://metacyc.org/META/NEW-IMAGE?object=PWY-181 PWY-181]
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*** Assignment: ec-number
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* Reaction: [[PPCOAOm]]
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-11734]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pantograph]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13451]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13615]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14131]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14229]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14262]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14278]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16540]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16557]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7094]]
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* [[PWY-7654]]
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* [[PWY-7656]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2220}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23516 23516]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=159}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01514 R01514]
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{{#set: centisome position=4.753363    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ACOA120or|ACOA140or|ACOA160or|ACOA40or|ACOA80or|LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN|PPCOAOm|RXN-11734|RXN-13451|RXN-13615|RXN-14131|RXN-14229|RXN-14262|RXN-14278|RXN-16540|RXN-16557}}
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{{#set: ec number=EC-2.7.1.31}}
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{{#set: pathway associated=PWY-7094|PWY-7654|PWY-7656}}
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{{#set: gene associated=Tiso_gene_3016}}
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{{#set: in pathway=PWY-181}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 21:01, 21 March 2018

Gene Tiso_gene_17967

  • right end position:
    • 2220
  • transcription direction:
    • POSITIVE
  • left end position:
    • 159
  • centisome position:
    • 4.753363
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17967&oldid=45245"