Difference between revisions of "ACYLCOADEHYDROG-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_4269 == * left end position: ** 13119 * transcription direction: ** POSITIVE * right end position: ** 14143 * centisome position: ** 86.806...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-_d...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_4269 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] ==
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* left end position:
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* direction:
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** 13119
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** acyl-_dehydrogenase
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* right end position:
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** Acyl-CoA dehydrogenase
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** 14143
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** acyl-CoA_dehydrogenase
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* centisome position:
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* ec number:
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** 86.80606   
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** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
 
* Synonym(s):
 
* Synonym(s):
 +
** fatty acyl coenzyme A dehydrogenase
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** acyl coenzyme A dehydrogenase
 +
** fatty-acyl-CoA dehydrogenase
 +
** general acyl CoA dehydrogenase
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** medium-chain acyl-coenzyme A dehydrogenase
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** long-chain acyl coenzyme A dehydrogenase
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** long-chain acyl-CoA dehydrogenase
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[SAMDECARB-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[ETF-Oxidized]][c] '''=>''' 1 [[TRANS-D2-ENOYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 H+[c] '''+''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''=>''' 1 a trans-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
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* [[BSUBPOLYAMSYN-PWY]]
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* [[ARGSPECAT-PWY]]
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== Genes associated with this reaction  ==
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* [[PWY-6834]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_5449]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_16631]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_6295]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_8272]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14511]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_10643]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_8271]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_7447]]
 +
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_883]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_6475]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_16113]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
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* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=13119}}
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* UNIPROT:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P16219 P16219]
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{{#set: right end position=14143}}
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** [http://www.uniprot.org/uniprot/P45952 P45952]
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{{#set: centisome position=86.80606    }}
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** [http://www.uniprot.org/uniprot/P15651 P15651]
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{{#set: reaction associated=SAMDECARB-RXN}}
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** [http://www.uniprot.org/uniprot/P11310 P11310]
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{{#set: pathway associated=BSUBPOLYAMSYN-PWY|ARGSPECAT-PWY|PWY-6834}}
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** [http://www.uniprot.org/uniprot/P08503 P08503]
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** [http://www.uniprot.org/uniprot/Q07417 Q07417]
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** [http://www.uniprot.org/uniprot/Q54857 Q54857]
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** [http://www.uniprot.org/uniprot/P45867 P45867]
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** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
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** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
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** [http://www.uniprot.org/uniprot/Q96329 Q96329]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=acyl-_dehydrogenase}}
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{{#set: common name=Acyl-CoA dehydrogenase}}
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{{#set: common name=acyl-CoA_dehydrogenase}}
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{{#set: ec number=EC-1.3.8}}
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{{#set: common name=fatty acyl coenzyme A dehydrogenase|acyl coenzyme A dehydrogenase|fatty-acyl-CoA dehydrogenase|general acyl CoA dehydrogenase|medium-chain acyl-coenzyme A dehydrogenase|long-chain acyl coenzyme A dehydrogenase|long-chain acyl-CoA dehydrogenase}}
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{{#set: gene associated=Tiso_gene_5449|Tiso_gene_16631|Tiso_gene_6295|Tiso_gene_8272|Tiso_gene_14511|Tiso_gene_10643|Tiso_gene_8271|Tiso_gene_7447|Tiso_gene_883|Tiso_gene_6475|Tiso_gene_16113}}
 +
{{#set: in pathway=FAO-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:01, 21 March 2018

Reaction ACYLCOADEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-_dehydrogenase
    • Acyl-CoA dehydrogenase
    • acyl-CoA_dehydrogenase
  • ec number:
  • Synonym(s):
    • fatty acyl coenzyme A dehydrogenase
    • acyl coenzyme A dehydrogenase
    • fatty-acyl-CoA dehydrogenase
    • general acyl CoA dehydrogenase
    • medium-chain acyl-coenzyme A dehydrogenase
    • long-chain acyl coenzyme A dehydrogenase
    • long-chain acyl-CoA dehydrogenase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • FAO-PWY, fatty acid β-oxidation I: FAO-PWY
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






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