Difference between revisions of "Tiso gene 1611"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5821 RXN-5821] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Gene == Gene Tiso_gene_1611 == * right end position: ** 22757 * transcription direction: ** NEGATIVE * left end position: ** 11099 * centisome position: ** 48.488...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5821 RXN-5821] ==
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== Gene Tiso_gene_1611 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 22757
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.4.3.4 EC-1.4.3.4]
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** NEGATIVE
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* left end position:
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** 11099
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* centisome position:
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** 48.488422   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[TYRAMINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[HYDRPHENYLAC-CPD]][c] '''+''' 1 [[AMMONIUM]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 oxygen[c] '''+''' 1 tyramine[c] '''+''' 1 H2O[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 (4-hydroxyphenyl)acetaldehyde[c] '''+''' 1 ammonium[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_8756]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[athaliana]]
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*** Assignment: ec-number
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[RXN-12196]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY-7431]], aromatic biogenic amine degradation (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7431 PWY-7431]
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*** Assignment: ec-number
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* Reaction: [[RXN0-5462]]
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* [[PWY-6802]], salidroside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6802 PWY-6802]
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** Source: [[annotation-in-silico_annotation]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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== Pathways associated ==
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* Category: [[orthology]]
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* [[PWY-7184]]
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** Source: [[orthology-athaliana]]
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* [[PWY-7198]]
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*** Tool: [[pantograph]]
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* [[PWY-6545]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-7210]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=22757}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30592 30592]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=11099}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02382 R02382]
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{{#set: centisome position=48.488422    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: ec number=EC-1.4.3.4}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: gene associated=Tiso_gene_8756}}
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{{#set: in pathway=PWY-7431|PWY-6802}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 21:01, 21 March 2018

Gene Tiso_gene_1611

  • right end position:
    • 22757
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 11099
  • centisome position:
    • 48.488422
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1611&oldid=45262"